Effector profile
| PlantPEAD ID: PlantPEAD01019 | Uniprot ID: A0A0P9X0R4 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. phaseolicola strain K4 | Other name: Pseudomonas savastanoi pv. phaseolicola |
| Gene name: HopI1_Pph 1448A | NCBI Gene ID: RBRG01000180 | |
| Entry name: A0A0P9X0R4_PSESH | Protein name: Type III effector HopI1 | |
| DOI: 10.1126/science.1203659 | ||
Gene/Protein information
Gene sequence:
ATGATCAACCTCACCAGCATTGCATCCTCGTTGGCGCGTGTGGCGCTCAGCGATTCGACAAAGCCAACGATAGACCGCGCGCTGAACGTCGTTAGCCATATCGCTGGCAAAGTGGCGTTGCAGGTCAACAGCTCATTGCTGGAGCAGAAAGGCCGGCTCAACGAGCGCCAGCAGAAAGGCCTCGCGGTAATCCTGGACGCGTTGCGCGGCAAGGAGCCGGTGACCAATGTCGAGACCCATGAAGGCGGAGGCCGATTCAACCTGGCACGAGCTGCCTTCGACGTAGCCAGCGTTGTCTGGGAGCGCGACAAGTCGATGCATAACGTGATGAGCTTTTTGGGCGTCAGCGACAGCCAGGGCAAGATGTTGTTCTCTCTGGGCAAGAAGCTGGCCGACGCGATGGCCAAGCCCGAACCTGGGTATGGCAAGCACAACAGTGAGGCGAACTATGCGTTCTTCTCCAGCAACCTGAAGCTGAACAAACTGATGAGCGACATCGCTGATCAACTGATCAACGAGATTCGTCAGTCGAACACCGATCGCGTACGACGACCCACACCGGGCCCATCCTGGAGACCTGAAAGCGCCCAACAACAAGCACGTCCGCAAACGCCTCCACGCACTCGCCCGCAGGCCAACAGCACACCGCCGCCACCGAAAGCAAAGCCCAATGCAGGCGCTAAGCGGCCGTCAACGCAACGGCCCCACAACACACCAGCTGCTGACGCTTCCTCGAAGGTGGGCGATTCCGGCCCCGCCAAGCCACCCGTCAAGCCGTTGTACGAGCACCTGGGACTCTCGGACATGACGGCAGACCTCTCCGCAGTCAAAACGGCCTACAAGAAAGCCGCGTTGAAGAACCATCCTGATAAAAACGCGGGCAACGTTGCGGAGGCGACTGAGCGTTTCAAAGTGATTTCAAATGCGTTCAAGATTTTGTCCGACCCAGAATTGCGCAAGAAATACGACAATGGCCTTATTAATGAGAAGGGCGACGAGGTCCAGGTCTGA
Protein sequence:
MINLTSIASSLARVALSDSTKPTIDRALNVVSHIAGKVALQVNSSLLEQKGRLNERQQKGLAVILDALRGKEPVTNVETHEGGGRFNLARAAFDVASVVWERDKSMHNVMSFLGVSDSQGKMLFSLGKKLADAMAKPEPGYGKHNSEANYAFFSSNLKLNKLMSDIADQLINEIRQSNTDRVRRPTPGPSWRPESAQQQARPQTPPRTRPQANSTPPPPKAKPNAGAKRPSTQRPHNTPAADASSKVGDSGPAKPPVKPLYEHLGLSDMTADLSAVKTAYKKAALKNHPDKNAGNVAEATERFKVISNAFKILSDPELRKKYDNGLINEKGDEVQV
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 36464.3 | 336 | 9.84 | -0.644 | 40.06 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress) | |
| Susceptible plant: Phaseolus vulgaris | Disease name: Halo blight of bean |
| Host classification: Eudicots | NCBI Species: 3885 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR001623,IPR036869
Pfam: PF00226
SMART: SM00271
KEGG:
PRINTS: PR00625