Effector profile
| PlantPEAD ID: PlantPEAD01020 | Uniprot ID: Q4ZNB6 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. syringae strain B728a | Other name: |
| Gene name: HopI1_Psy B728A | NCBI Gene ID: CP000075 | |
| Entry name: Q4ZNB6_PSEU2 | Protein name: Type III effector HopI1 | |
| DOI: 10.1126/science.1203659 | ||
Gene/Protein information
Gene sequence:
ATGATCAACCTCACCAACCTTGCATCTTCGTTGGCGCGAGTGGCGCTCAGCGATTCGACAAAGCCAACGATAGACCGCGCGATGAACGTCGTCAGCCATATCGCTGGCAAAGTGGCGTTGCAGGTCAACAGCTCATTGCTGGAGCAGAAAGGCCGGCTCAACGAGCGCCAGCAGAAAGGCCTCGAGGTGATCCTCGACGCATTGCTCGGCAAGGAACCGGTGACCCATGTCGAGACGCACGAAGGGGGAGGCCGATTCAATCTGGCGCGAGCTGCCTTCGACGTGGCCAGCGTTGTCTGGGAGCGCGACCAGTCGATGCGCAACGTGATGAGCTTTTTGGGCATCAATGATAGCAAGGGCAACCTGCTGTTCTCTCTGGGCAAGACGCTGGCCGACGCGATGGCCAGGCCCGAACCCGAGAATGGCAAGCACAACAGTGAGGCGAACTACGCATTCTTCTCCAGCAACTTGAAGCTGAACAAACTGATGAATGACATCGCTGACCAGGTGATCAACGAGATTCGTCAGCAGAACACCGATCGCGTGCGACGACCCACACCGGGCCCATCCTGGAGACCTGAAAGTACTCAACAGCAAGCACGCCCACAAACGCCTCCAAGCGCTCGCCCCCAGGCCAATAGCGCGCCGCCACCGCCGAAAGCCCAGCCCGATGCGGGCGCTCAGCGGCCGTCAACAGAGCGGCCCCCCAAAACAACCCCCACTGGCGCGTCCGCGAAGGTGGACGATTCCGCCCCCGCCAAACCACCCGTGAAACAGTTGTACGAGCACTTGGGCCTCTCGGACATGACGGCGGACCTCTCCGCAGTCAAAAAGGCTTACAAGAAGGCCGCGTTGAAGTACCACCCTGATAAAAACGCGGGCAACGTGGCCGAGGCGAATGAGCGTTTCAAAAAAATTTCAAATGCGTTCAGGATTTTGTCCGATCCAGAATTGCGTACGAAATACGACAATGGCGTTATTGATGAGAACGGTAACGAGTTCAAGACCTGA
Protein sequence:
MINLTNLASSLARVALSDSTKPTIDRAMNVVSHIAGKVALQVNSSLLEQKGRLNERQQKGLEVILDALLGKEPVTHVETHEGGGRFNLARAAFDVASVVWERDQSMRNVMSFLGINDSKGNLLFSLGKTLADAMARPEPENGKHNSEANYAFFSSNLKLNKLMNDIADQVINEIRQQNTDRVRRPTPGPSWRPESTQQQARPQTPPSARPQANSAPPPPKAQPDAGAQRPSTERPPKTTPTGASAKVDDSAPAKPPVKQLYEHLGLSDMTADLSAVKKAYKKAALKYHPDKNAGNVAEANERFKKISNAFRILSDPELRTKYDNGVIDENGNEFKT
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 36760.4 | 336 | 9.48 | -0.704 | 37.74 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress) | |
| Susceptible plant: Arabidopsis thaliana | Disease name: NONE |
| Host classification: Eudicots | NCBI Species: 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR001623,IPR036869
Pfam: PF00226
SMART: SM00271
KEGG: psb:Psyr_4326
PRINTS: PR00625