Effector profile
| PlantPEAD ID: PlantPEAD01025 | Uniprot ID: Q93TF2 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. maculicola strain M6 | Other name: |
| Gene name: HopX1_Pto DC3000 | NCBI Gene ID: AF359557 | |
| Entry name: Q93TF2_PSEYM | Protein name: Type III effector HopX1 | |
| DOI: 10.1126/science.1203659 | ||
Gene/Protein information
Gene sequence:
ATGAGCCACGACAATGCGCTCAGCCTTTCCCTCGCGACCTCACCCACGGCCAACGCCGATCCGCTGGCCACCAGCACACATCTTCCGCCGGCGCGTTTTTTCGAAGACGGCACCGCGCTCAATCGGTTATTGCTGGAAGCGCCGTACATGGCACGGTGCAGTGACGACAAAACCGCGACCCGCGTTCGTCCTCGTGAATACGCGCTGCGTTATCCCTATATGCAGGTCAATCGCCCCGGCATGGTGTCCTGGCTGGTGTTTGACCTGGACCATGCCAACGCCCTGGCCTGGGACGATGCTGGGTTGCCCGCGCCGAACCTGATGGTGCGCAACCGCAAAAGCGGCCATTCCCAGTTGTTCTACGCCGTGCCGTCCGTGTGCACCACCGAGAACGCACGGGCCAAGCCGATTCAGTACATGAAAGCAATCTATGCCGCGTTTGCCGCTCGCCTCGACGCGGACGTGGACTACCACGGTGGCCCTGTGGCCAAAACACCCGGTCACCCCTGGTGGGAGACCACCGAATTCCACAACCACGTGTATGAACTGGGCGAACTGGCGGGCGCGGTGGAGTTGACTGTCAAGCCTTGGGCCACTGGTCCCAAGCTTGACCAGGTCAGCCATTCACGGCACTGCATACTGTTCGAGCAGCTGCGCTATTTTGCGTACAGCATCGTCAATCGCGAGCGCGAGCTGGGTTCGTTCGAGTCGTTCATGCGCTCGCTCGATGCGTATGCCTACAACCACAACAGCTTTCTAAAGCAGGGTTTTTCGGAAAACCTGCCCCTGTCGTCCATACGCGCCACGGTTAAATCCGTAGGCCGCTGGACGTGGGATCGCTACACCGGTGATCGCCGTTGCCACCGAGGAGCCATGCAGCTCGATGGCAGCTTGTCGCTCACTGAACGGCAGAGCCTGGCGGCCAAGCGCACTAATGAGCTGCGGCAAAAAGCCACAGAATCGAAGATACGGGGCGCGTGCCGGCAGCTTCAAGACCAGGGCAAGGCACTGGTACGTTCTGCGATTGCAACGCTCGCCGGCGTATCGGTGAGAACGGTGGCCAGCTACGCGCACATCCTCACGGAAGTCTCCCGACCGGCCAGTGTGAGTGTTCTGAGGGGCAGCAGTAAGGCTATGTCCGTACCACCTCGGCAGGATCGTTCACCCGCTAACCCACCTGTTCAGGCCCCTGTAGGTCAGCCTGCTGATGGCCGCGCCTCGGGTGTGCAATCCGGTGTACATCAGATATCTGCGGCCCCCAAGGGGCTGCAAGCCCGAGAGCCCTTAAAAAGAGAACATGAGGATGGTTCATGA
Protein sequence:
MKIHNAGLTPPLPGISNGNVGKAAQSSITQPQSQQGSYGLPPESSETRPDRARANYPYSSVQTRLPPVASAGKPLPDTPSSLPGYLLLRRLDHRPVDQEGTKSLIPADKAVAEARRALPFGRGNIDVDAQLSNLESGARTLAARCLRKDAEAAGHEPMPANEPMNWHVLVAMSGQVFGAGNCGEHARIASFAYGALAQENGRSEYENIYLAASTEEDHVWAETDESQSGTSTIVMDPWSNGSAIFAEDSRFAKNRNAVERTDTFNLSTAAEAGKITRETAEKALTQVTTRLQKRLADQQEQVSPIKSGRYRPEKSVLDDAFVRRVSDKLTSPDLRRALQVDIEAVGVAMSLGTKGVKDATRQARPLVELAVKVASPQGLARRDV
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 41402.3 | 384 | 7.77 | -0.54 | 49.91 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress) | |
| Susceptible plant: Arabidopsis thaliana | Disease name: NONE |
| Host classification: Eudicots | NCBI Species: 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: