Effector profile
| PlantPEAD ID: PlantPEAD01027 | Uniprot ID: A0A0N0FWI1 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. maculicola strain ICMP 11281 | Other name: |
| Gene name: HOPY1 | NCBI Gene ID: RBOO01000058 | |
| Entry name: A0A0N0FWI1_PSEYM | Protein name: Type III effector HopY1 | |
| DOI: 10.1126/science.1203659 | ||
Gene/Protein information
Gene sequence:
ATGAACATTACGCCGCTCACGTCAGCCGCGGGCAAGGGCTCGTCCGCACAAGGCACAGACAAAATTTCCATTCCCAACTCCACGCGCATGATCAATGCCGCTTCAATCAAGTGGTTGAATAAGGTGCGTAGCGCCATCAGTGACCACATCCGCACCAGCATCGAGAAAGGGAAACTGTTCGAGCTCGCCTCCTTGGGCAGCAACATGTTCGGTGTCCCGGCTCTTTCAGCGCGCCCCTCGACGCTCCAACCTGTGTTGGCGTTTGAGGCTGACCCCAATCACGACCTGAACCTTGTCAGGGTCTATATGCAGGACAGCGCCGGCAAGCTCACTCCCTGGGACCCGACGCCCAACGCGGTCACGACGACGTCGAATCCATCAGAGCCTGATGCGCAGAGCGATACGGCTTCGTCATCATTACCTCGGCGGCCTCCCGCAGGCTCGGTGCTGAGTTTGCTGGGCATTGCGCTGGATCACGCGCAACGCCACAGTCCTCGCGCGGACAGGTCTGCCAAGGGACGACCTGGCCGAGAGGAGAGGAACGGGGCAAGGTTCAATGCCAAGCAAACAAAGCCGACAGAGGCTGAAGCCTACGGTGATCATCAGACACCCAATCCTGATTTGCACAGGCAAAAAGAGACAGCTCAACGCGTTGCTGAAAGCATCAACAGCATGCGAGAGCAGCAAAATGGAATGCAACGCGCCGAAGGGCTTCTCAGAGCCAAAGAAGCGTTGCAAGCTCGGGAAGCCGCGCGCAAGCAGCTTCTGGACGTGCTCGAGGCCATCCAGGCTGGCCGTGAAGACTCCACCGACAAGAAGATCAGCGCCACTGAAAAGAACGCCACGGGCATCAACTACCAGTGA
Protein sequence:
MNITPLTSAAGKGSSAQGTDKISIPNSTRMINAASIKWLNKVRSAISDHIRTSIEKGKLFELASLGSNMFGVPALSARPSTLQPVLAFEADPNHDLNLVRVYMQDSAGKLTPWDPTPNAVTTTSNPSEPDAQSDTASSSLPRRPPAGSVLSLLGIALDHAQRHSPRADRSAKGRPGREERNGARFNAKQTKPTEAEAYGDHQTPNPDLHRQKETAQRVAESINSMREQQNGMQRAEGLLRAKEALQAREAARKQLLDVLEAIQAGREDSTDKKISATEKNATGINYQ
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 31061.7 | 287 | 9.54 | -0.739 | 39.01 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress) | |
| Susceptible plant: Arabidopsis thaliana | Disease name: NONE |
| Host classification: Eudicots | NCBI Species: 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR018581
Pfam: PF09589
SMART:
KEGG:
PRINTS: