Effector profile
| PlantPEAD ID: PlantPEAD01035 | Uniprot ID: A0A833S0W4 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 4787 | Pathogen type: Oomycota |
| Species: Phytophthora infestans | Strain: KR_1_A1，KR_2_A2 | Other name: Potato late blight agent, Botrytis infestan |
| Gene name: PITG_13936 | NCBI Gene ID: WSZM01000237 | |
| Entry name: A0A833S0W4_PHYIN | Protein name: RxLR effector protein | |
| DOI: 10.1038/nature08358 | ||
Gene/Protein information
Gene sequence:
ATGCGTCTCACATGCATGCTCGCAGTGCTCATCGTGGCCACTTTCCACGCCACTGGCGATGCGCTTTCTGCGGTTGCGATCAATGCTATCAATGATAATGGTGTTGACATGAGCATTCCAGCCCACGTGCATGGCCAGCGTTTACTGCGTCGTGTCGGAAACGATGAAGATGAGATTATGAAAGAGAGAACCGGAGGCTTCATGGATAAGCTAAAGAGTGTGGCGGAGAAAATCAAGCCCTCGAAGGCCGTGGAAAAAGTTAAGGAGATGGTCGTCACGAAACCCGAATAA
Protein sequence:
MRLTCMLAVLIVATFHATGDALSAVAINAINDNGVDMSIPAHVHGQRLLRRVGNDEDEIMKERTGGFMDKLKSVAEKIKPSKAVEKVKEMVVTKPE
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 10487.3 | 96 | 7.91 | -0.071 | 19.58 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: Solanum lycopersicum, Solanum tuberosum | Disease name: Late blight |
| Host classification: Eudicots | NCBI Species: 4081, 4113 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: