Effector profile
PlantPEAD ID: PlantPEAD01039 | Uniprot ID: D0N0J0 | Source: Article |
Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 4787 | Pathogen type: Oomycota |
Species: Phytophthora infestans | Strain: strain T30-4 | Other name: Potato late blight agent, Botrytis infestan |
Gene name: PITG_04090 | NCBI Gene ID: XM_002905755 | |
Entry name: D0N0J0_PHYIT | Protein name: Avrblb2 family secreted RxLR effector peptide protein, putative | |
DOI: 10.1038/nature08358 |
Gene/Protein information
Gene sequence:
ATGCGCAGTTTTCTCTACGGTGTTCTTGCCTTTGCGGTTTTAGCTAGGAGCAGCGCCGTCGCAGCATTCCCAATCCCCGACGAGTCTCGCCCCTTGTCGAAGACATCTCCTGACACTGTGGCCCCAAGATCGCTTCGGATCGAGGCCCAAGAAGTTATTCAGAGCGGCCGGGGAGACGGATATGGTGGGTTCTGGAAAAACGTAGCCCAGAGTACTAACAAGATCGTCAAGAGGCCGGATATCAAGATAAGCAAACTTATCGCGGCGGCCAAGAAGGCAAAAGCAAAAATGACGAAGTCCTGA
Protein sequence:
MRSFLYGVLAFAVLARSSAVAAFPIPDESRPLSKTSPDTVAPRSLRIEAQEVIQSGRGDGYGGFWKNVAQSTNKIVKRPDIKISKLIAAAKKAKAKMTKS
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
10792.6 | 100 | 10.48 | -0.196 | 52.83 |
Plant infestation information
Experimental plant: | |
Susceptible plant: Solanum lycopersicum, Solanum tuberosum | Disease name: Late blight |
Host classification: Eudicots | NCBI Species: 4081, 4113 |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
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No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG: pif:PITG_04090
PRINTS: