Effector profile
| PlantPEAD ID: PlantPEAD01067 | Uniprot ID: A0A976IID1 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 4779 | Pathogen type: Oomycota |
| Species: Bremia lactucae | Strain: SF5 | Other name: |
| Gene name: BLR20 | NCBI Gene ID: SHOA02000012 | |
| Entry name: A0A976IID1_BRELC | Protein name: Secreted RxLR effector | |
| DOI: 10.1371/journal.pone.0226540 | ||
Gene/Protein information
Gene sequence:
ATGCGTGGGCACAATTTGCGGTTCCTGTTTCTTGCTGTGATCGCTGCAGCTGTCGTGCTCTTAATGGCGGGAAAGCAGCGTCAATGCTTGGAACTAATAAGCATCGAATATTTCTCAAAACAATATATTGCAGCTGTATCCAATGTCTCCGATCCAGATAGTAGAGCCTTGCGATACGCTTCAAAACCAGGAATTGGCACGGAAGAGAGGGGAATTGGAAGCTCCTTAAAAAACAAGTTGTATGATTCTGCGTTCAAGTGGGCATTAAAGTTTCACATGAATCCAAAGCTTCTATTGTATCTGTTAAACGTGCCTTTCTCGCACCCACATGCTGAGATGGACCGAAATTTTGGCCGTTGGATTCATTATGTGATTAAGTTCGAGTCATTTCAAGATGAGGCTCATCGATTTTCTGAAAGCACGTTCTACAAATTACTTGAAACAAAGCTTACGACGGAAGATATGGCAATGCTTTTTCAATCGCTCGAAACATGGCCAGATGGCGAGCGTCTCGCGGGAAAAATGCAGGCGTACATGATTTTGAATGCTCCGAGCAGGGATGTGATGCATATAGCATGGAATCGAGTCCGAGAACCCCCCGAGCACGTTTTTCGTATCCTAAATCTTGAAAACGAGACTATTCCTGATAGGGATCGACTGATAACGGAGTGGCTTCGATATTGCCGATCGTACCGAGAGACGGAGTCCGCTGTAGCCTTTCAAGGCTTACGCATTCCTGATGAATTATTTTATTCTGAGTTACTACGCTTGTTGAGAAAAACAAAAGCAGATGAAGATATCATCGCATTTCTTCAATCAATTCGAAATATCGACGGTATGGAAACTTTTACTGATCATATAGAGGCTGTCGCTGATCGTACACTGCTTACACATGAGATATTGCTGAAAAGAGTGGAGCATCCGGAAACGTTTTTTAATCGTCTACATCTTCAAAATGCGTTTCTGGCGTACAACTCTAACTTTTTAAAGTGGCTCTCCTACATTGCCGTGTACAACAAACAACCAGGAATTGCGCCATTTACAATGGAGAAAGCATTCGAGTTCATTCGAAGCTCTTCAGAAGTTCGCCGACTCGATCTTTACTTTGGTGAATTTCTCGAAGCCAAAATGAAGGACGTTCCAGAGCTCAAGGAGGAGCTTCGAAAAATGCAAATTGAAGTTTTCAAATATTGGCGATCGTTGAATATTAAACCACTGACCCTTTGGAATACGGTGAATGTTCACAAGCGAGGCCGATTGAACACGCCGGAAATGAAGAATAGCTTTGCATATCGTTCTATACAGAGTTACACGAAGTATTTTGCTCAACATCTGGATAACACTGATGTGTCGAATAAAGTGCTCATCGAGATCGCCGATGGCGAGCTATACAAAGCTTCGAAATTGGCATCCGGAATTCTCGAAATTTGA
Protein sequence:
MRGHNLRFLFLAVIAAAVVLLMAGKQRQCLELISIEYFSKQYIAAVSNVSDPDSRALRYASKPGIGTEERGIGSSLKNKLYDSAFKWALKFHMNPKLLLYLLNVPFSHPHAEMDRNFGRWIHYVIKFESFQDEAHRFSESTFYKLLETKLTTEDMAMLFQSLETWPDGERLAGKMQAYMILNAPSRDVMHIAWNRVREPPEHVFRILNLENETIPDRDRLITEWLRYCRSYRETESAVAFQGLRIPDELFYSELLRLLRKTKADEDIIAFLQSIRNIDGMETFTDHIEAVADRTLLTHEILLKRVEHPETFFNRLHLQNAFLAYNSNFLKWLSYIAVYNKQPGIAPFTMEKAFEFIRSSSEVRRLDLYFGEFLEAKMKDVPELKEELRKMQIEVFKYWRSLNIKPLTLWNTVNVHKRGRLNTPEMKNSFAYRSIQSYTKYFAQHLDNTDVSNKVLIEIADGELYKASKLASGILEI
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 55830.3 | 476 | 8.51 | -0.305 | 52.86 |
Plant infestation information
| Experimental plant: Nicotiana benthamiana (no common name found) | |
| Susceptible plant: Lactuca sativa | Disease name: Downy mildew of lettuce |
| Host classification: Eudicots | NCBI Species: 4236 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: