Effector profile
PlantPEAD ID: PlantPEAD01068 Uniprot ID: A0A3M2V7A2 Source: Article
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. atrofaciens strain DSM5025 Other name:
Gene name: 4480_effector_Paf DSM5025 NCBI Gene ID: RBNQ01000061
Entry name: A0A3M2V7A2_PSESX Protein name: Ribosomal RNA small subunit methyltransferase E
DOI: 10.1126/science.1203659
Gene/Protein information
Gene sequence:
ATGAGACTGTCCCGCTTTTTTACTGAAACGCCGCTGAGTCTGGGCGAGCATGAACTGCCTGAGGCCCAGGCGCATTACATCAGCCGCGTGCTGCGCATGACCGAAGGTGACGCGCTGCAACTGTTCGACGGTTCGGGTCAGGAGTTTCTCGGCACCTTGCTGGAAGTCGGCAAGAAGCGCGTGCATGTGCAGCTCACTGAAAGCTTCGCGGGCCAGGTAGAGTCAGGCCTGCGCATTCATCTCGGTCAAGGCCTGTCGCGGGGCGAGCGGATGGACTGGGCCATTCAAAAGGCCACCGAACTGGGCGTCAGCGAAATCACGCCGATTGTCAGCGAACGCTGCGAGGTGCGCCTCAAGGACGAACGCGCCGAAAAGCGTCAGGCGCACTGGCAGCAGATCGCAATCAGCGCCTGCGAGCAATGTGGCCGGTCTGTGGTGCCAGTGATTCATGCGCCGATGCCGCTGGCCGAGTGGATCAAGCACACCGAGGCCGACCTGAAACTGGTCCTGCACCCGGTGGCCGAACCCCTGACCAGCCACGACAAACCTGTCAGCCTGGCCTTTCTGATTGGTCCGGAAGGCGGTCTGAACGATGCGGAAGTCGCTCAGGCGCAAGACGCCGGCTTCCACGCCGCACGCCTCGGCCCACGCGTGCTGCGCACTGAAACCGCTCCCGTGGTCGCGCTCAGCGTGGCGCAGCAGTTGTGGGGCGATTTTTGA
Protein sequence:
MRLSRFFTETPLSLGEHELPEAQAHYISRVLRMTEGDALQLFDGSGQEFLGTLLEVGKKRVHVQLTESFAGQVESGLRIHLGQGLSRGERMDWAIQKATELGVSEITPIVSERCEVRLKDERAEKRQAHWQQIAISACEQCGRSVVPVIHAPMPLAEWIKHTEADLKLVLHPVAEPLTSHDKPVSLAFLIGPEGGLNDAEVAQAQDAGFHAARLGPRVLRTETAPVVALSVAQQLWGDF
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
26345.1 239 5.69 -0.175 41.56
Plant infestation information
Experimental plant: Arabidopsis thaliana (related: thale cress)
Susceptible plant: Arabidopsis thaliana Disease name: NONE
Host classification: Eudicots NCBI Species: 3702
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.