Effector profile
| PlantPEAD ID: PlantPEAD01070 | Uniprot ID: A0A1D9QD76 | Source: Article |
| Localization: Apoplastic(Exp) | Pathogen taxonomy ID: 665079 | Pathogen type: Fungi |
| Species: Sclerotinia sclerotiorum | Strain: strain ATCC 18683 / 1980 / Ss-1 | Other name: Whetzelinia sclerotiorum |
| Gene name: PINE1 | NCBI Gene ID: CP017823 | |
| Entry name: PINE1_SCLS1 | Protein name: Secreted effector protein PINE1 | |
| DOI: 10.1038/s41467-022-29788-2 | ||
Gene/Protein information
Gene sequence:
ATGAAGCTCAGTCAACCACTAAGCATCTTCGCGATTCTCGCAGCATCAACTGTCGCAGTGGCCGTTCCTCAAGACGATGCATGTGCACAATGCCTCACTGAGGGCACTTTCTGCGAGGGCTTCGCAGGACCCGTTGGCACCTGTTGTGATGGATTAGTGTGCGAAAACGCGCCAGGTGTTGCAGATGATGCACACTGCATTCGGAAGAAGAAGTGCTTGGCGAAGGGCGAAACTTGCGTGAGCATTGCAGGCCCTGTTGGTACATGCTGTACTGGAAAATGTACCTTCGTTGCACCGGACTACAGCGTTTGCAAGTGA
Protein sequence:
MKLSQPLSIFAILAASTVAVAVPQDDACAQCLTEGTFCEGFAGPVGTCCDGLVCENAPGVADDAHCIRKKKCLAKGETCVSIAGPVGTCCTGKCTFVAPDYSVCK
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 10653.4 | 105 | 5.14 | 0.43 | 36.56 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: Brassica napus | Disease name: White mold |
| Host classification: Eudicots | NCBI Species: 3708 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|---|---|---|---|
|
Q9M5J9
|
Polygalacturonase inhibitor 1
|
PGIP1
|
Arabidopsis thaliana (related: thale cress)
|
MDKTATLCLLFLFTFLTTCLSKDLCNQNDKNTLLKIKKSLNNPYHLASWDPQTDCCSWYCLECGDATVNHRVTALTIFSGQISGQIPAEVGDLPYLETLVFRKLSNLTGTIQPTIAKLKNLRMLRLSWTNLTGPIPDFISQLKNLEFLELSFNDLSGSIPSSLSTLPKILALELSRNKLTGSIPESFGSFPGTVPDLRLSHNQLSGPIPKSLGNIDFNRIDLSRNKLQGDASMLFGSNKTTWSIDLSRNMFQFDISKVDIPKTLGILDLNHNGITGNIPVQWTEAPLQFFNVSYNKLCGHIPTGGKLQTFDSYSYFHNKCLCGAPLEICK
|
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: