Effector profile
| PlantPEAD ID: PlantPEAD01079 | Uniprot ID: A0A1D9QM29 | Source: Article |
| Localization: Apoplastic(Exp) | Pathogen taxonomy ID: 665079 | Pathogen type: Fungi |
| Species: Sclerotinia sclerotiorum | Strain: strain ATCC 18683 / 1980 / Ss-1 | Other name: Whetzelinia sclerotiorum |
| Gene name: SsCP1 | NCBI Gene ID: CP017829 | |
| Entry name: A0A1D9QM29_SCLS1 | Protein name: Uncharacterized protein | |
| DOI: 10.1111/nph.14842 | ||
Gene/Protein information
Gene sequence:
ATGCAATTCCCAACCATCGCCACCCTCCTCACCATGGCCACCAGTGCCCTCGCCATCACCGTCTCCTACGACACCGGATACGATGATGCATCCCGCTCCTTGGACGTTGTCTCCTGTTCCGACGGAAGCAACGGACTCATCAGAAAGGGTTTCAGCACCCAAGGATCCTTGCCAAACTTCCCCAACATTGGTGGTGCATCCACTATCGGCGGATGGAACAGTGCCAGCTGTGGAAGCTGTTATCAATTGAGCTATGCAGGAAGAAGCATCAATGTGCTTGCGATTGATCATGCCGCGGCTGGATTCAACATTGGTCAGAGGGCTATGGATACTTTGACTGGTGGTCAAGCAGTCGCTTTGGGAAGAATCGATGCTTCCTATGTCCAACTTGACCCAAGTGCTTGTGGATTGTAA
Protein sequence:
MQFPTIATLLTMATSALAITVSYDTGYDDASRSLDVVSCSDGSNGLIRKGFSTQGSLPNFPNIGGASTIGGWNSASCGSCYQLSYAGRSINVLAIDHAAAGFNIGQRAMDTLTGGQAVALGRIDASYVQLDPSACGL
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 13979.6 | 137 | 4.6 | 0.179 | 41.58 |
Plant infestation information
| Experimental plant: Brassica napus (related: rape) | |
| Susceptible plant: Brassica napus | Disease name: White mold |
| Host classification: Eudicots | NCBI Species: 3708 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|---|---|---|---|
|
P33154
|
Pathogenesis-related protein 1
|
Arabidopsis thaliana (related: thale cress)
|
MNFTGYSRFLIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTCNGVCGHYTQVVWRKSVRLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY
|
External Links
Interpro: IPR010829,IPR036908
Pfam: PF07249
SMART:
KEGG: ssl:SS1G_10096
PRINTS: