Effector profile
| PlantPEAD ID: PlantPEAD01114 | Uniprot ID: A0A8A1V8Y0 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 4784 | Pathogen type: Oomycota |
| Species: Phytophthora capsici | Strain: | Other name: |
| Gene name: CRN12_997 | NCBI Gene ID: MW655877 | |
| Entry name: A0A8A1V8Y0_PHYCP | Protein name: CRN12_997 protein | |
| DOI: 10.1094/MPMI-06-20-0172-R | ||
Gene/Protein information
Gene sequence:
ATGAAGCTCTTTTGTGCAATGGTTGGCATGGCGGTAGGCATTATCGAGGTGGACATTGACAATAATGCCTACGTTACCGCGCTGAGGGATGCGATCGCGACAAAGAATGAAGAGATCAAGAAATCTGCACTTCGGCTGAAGCTCTTCCTAGCGAAGAAAGGCAATGCATGGCTCACAGACACAGAAGCGGCGGGTGTAGGTGGTGATCTTGAATCTCTAGGCTTTAAGTTGATGAAGAGCGTACGACTTCTCAAGAACCCAGAATACTTTGGAGAAGATTTTCAAACGGGCGAGGGTCACGTCCATGTGCTAGTAGTCGTACCAGAGGAAAATATGACGGTGGGCGAACCTGTTGTGGACGTGGATGGTGTGAACATTTATGTCACGAGCAATATGACACTTAATCCACCCGACTTAGTGGCATTCTGGAGAGCCTTTCAAGCAATTGATACCAAGATTGAAGCGGATTCTGTGATCGCGCTACCAGAAGGAACTTTTATTCTTGGAAACCCCAAAGTAGGCTCTCGAATTTATATCCGTCCTTGTTACCCTCAGCTATGGGAAGTTTGTTGGCATATTATTCACCATGAAACACCAAATCTCGTGATCCTCGGGAATCCTGGAATCGGCAAAACATACTTTGGTTACTTGCTTTTGTTGTTTCTTGCCCGCCTTGGGAAAACGGTGGTGTATGAGAGCAGACGGACCAAGAGGCGCTTCCTGTTTTCTCGGAATGTGGTAATTAAAGGATCGCAGCAGGATTTCGACGATATTCTCGAACAGGATACAACCTATTATGTTGTGGATGCCATGGAGCCTCGAGAGTTTCAAGCGAGGACGATTCTTGTGACGTCGCCGGACCGCGATGTTTGGTACACGTTTAACAAGATAAGTTGTCAAACCCGCTACATGCCAGTTTGGACGGAGCAAGAGATATTTAGTTGTCGAGAGCAAGTGTACTCGACTATTCCAAAGTCCGTCGTGCAGAAATGCTTTTACCGATGGGGTGGCATCCCACGTTATGTCTTGCAGTACGCTCAGTTCGATAACCACCAGGCTTTGATCGAAAAAGCGTTGGAGGTAGTCGATTTTGACTGGTTAATGAATGCCTACGGGAAACTCGATGATAACAACAGCCAAGCGCATCGATTACTCCACTATCGTGTCAATGAACGCTTTACTTGTGATTATTTCGGCTTTGCTTCTTCATTTGTGCAGCACGAAGTGTACCAGCATTTACACAAGAAAGAGAAACGAAAACTACTCGAGTTTATTGGTCGTTCAGTTGGGAGTGGCGATCTTTCTGTTCTTCGCGATCGCTTGGCTGAAGAGCATGATCATCACTGCGCAAGAACGCATAAAAAGCTTAAACGTTTC
Protein sequence:
MKLFCAMVGMAVGIIEVDIDNNAYVTALRDAIATKNEEIKKSALRLKLFLAKKGNAWLTDTEAAGVGGDLESLGFKLMKSVRLLKNPEYFGEDFQTGEGHVHVLVVVPEENMTVGEPVVDVDGVNIYVTSNMTLNPPDLVAFWRAFQAIDTKIEADSVIALPEGTFILGNPKVGSRIYIRPCYPQLWEVCWHIIHHETPNLVILGNPGIGKTYFGYLLLLFLARLGKTVVYESRRTKRRFLFSRNVVIKGSQQDFDDILEQDTTYYVVDAMEPREFQARTILVTSPDRDVWYTFNKISCQTRYMPVWTEQEIFSCREQVYSTIPKSVVQKCFYRWGGIPRYVLQYAQFDNHQALIEKALEVVDFDWLMNAYGKLDDNNSQAHRLLHYRVNERFTCDYFGFASSFVQHEVYQHLHKKEKRKLLEFIGRSVGSGDLSVLRDRLAEEHDHHCARTHKKLKRF
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 52899.7 | 459 | 6.95 | -0.225 | 38.59 |
Plant infestation information
| Experimental plant: Solanum lycopersicum (related: tomato) | |
| Susceptible plant: Solanum lycopersicum | Disease name: Phytophthora blight of tomato |
| Host classification: Eudicots | NCBI Species: 4081 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR045379,IPR027417
Pfam: PF20147
SMART:
KEGG:
PRINTS: