Effector profile
| PlantPEAD ID: PlantPEAD01115 | Uniprot ID: Q86RQ2 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 51029 | Pathogen type: Nematoda |
| Species: Heterodera glycines | Strain: | Other name: Soybean cyst nematode worm |
| Gene name: Hs4E02 | NCBI Gene ID: AF473826 | |
| Entry name: Q86RQ2_HETGL | Protein name: Gland-specific protein g4e02 | |
| DOI: 10.1111/tpj.14295 | ||
Gene/Protein information
Gene sequence:
ATGTCCCTTTTCCGTCCTCAATCGCTGCTTCTTCTGGCCGCTCTTTGCCTGTCCTTTGCGCTGCTCTTTGTCACTTCGTCGGAAGAGGGAGGGCGAGTGAAGCGCGGCGGATGGCCTTGGGATTGGGCCGGCAAACAACTGTGCAAAACATCGGCAAATTGCAAGTGCAAGGATGGCAAAAATTGGGCCAAATGTGTAAAGTCGGAAGGCTACGCGGCCAGCAATTGTTGCGACAAAAATTACGTGTGGGCATGTTGCGGGAAGAAGCCCAAACATTGA
Protein sequence:
MSLFRPQSLLLLAALCLSFALLFVTSSEEGGRVKRGGWPWDWAGKQLCKTSANCKCKDGKNWAKCVKSEGYAASNCCDKNYVWACCGKKPKH
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 10179.9 | 92 | 9.26 | -0.267 | 39.44 |
Plant infestation information
| Experimental plant: Nicotiana benthamiana (no common name found) | |
| Susceptible plant: Glycine max | Disease name: Soybean cyst |
| Host classification: Eudicots | NCBI Species: 3847 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|---|---|---|---|
|
P43297
|
Cysteine proteinase RD21A
|
RD21A
|
Arabidopsis thaliana (related: thale cress)
|
MGFLKPTMAILFLAMVAVSSAVDMSIISYDEKHGVSTTGGRSEAEVMSIYEAWLVKHGKAQSQNSLVEKDRRFEIFKDNLRFVDEHNEKNLSYRLGLTRFADLTNDEYRSKYLGAKMEKKGERRTSLRYEARVGDELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGAVEGINQIVTGDLITLSEQELVDCDTSYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVDGTCDQIRKNAKVVTIDSYEDVPTYSEESLKKAVAHQPISIAIEAGGRAFQLYDSGIFDGSCGTQLDHGVVAVGYGTENGKDYWIVRNSWGKSWGESGYLRMARNIASSSGKCGIAIEPSYPIKNGENPPNPGPSPPSPIKPPTQCDSYYTCPESNTCCCLFEYGKYCFAWGCCPLEAATCCDDNYSCCPHEYPVCDLDQGTCLLSKNSPFSVKALKRKPATPFWSQGRKNIA
|
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: