Effector profile
PlantPEAD ID: PlantPEAD01116 | Uniprot ID: Q86DE7 | Source: Article |
Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 51029 | Pathogen type: Nematoda |
Species: Heterodera glycines | Strain: | Other name: Soybean cyst nematode worm |
Gene name: G32E03 | NCBI Gene ID: AF500036 | |
Entry name: Q86DE7_HETGL | Protein name: Putative gland protein G32E03 | |
DOI: 10.1105/tpc.18.00570 |
Gene/Protein information
Gene sequence:
ATGCGCGCCGTTCTCTTCCTGGCCATGGTTTGCTTGGTGATGGCTGTTATTCTTGAGACAGCCAACTCAAAGGCAGTGAAAAAAGACAATAAGAAAGGAGCAATTACAACGCCAGCAAAAGGAAAAGCGGCGCCGAAAGGAGCAGCGAAAGGAGGAATTAAAAAAGACGCAAAATCAAAGGGAAAAGGAAAAAAGGACGCCAAAGGCAAAAAGGACAAAAAAGCTAAACCAGCCAAAGGGAAAGCATCGCCTAAAAATGACAAAAAACCCCCAGCTGCCAAAGCAAATGACAAAAAGAGCCCAACCAAACCAATGGCAGCAGTGAAAGCCGTGCCAAAGGCGGCGGAGAATGCTCAGAAGGGACCGTCGAGTGCGGAAGTGGTGGCGGAGGAAAGCAACTTGGACACTGAGGCGGTCGACGACTTGGGGGTTGGACCTGAGGCGGTCGACGACTTGGGGGCGGAAGAGTCGGACTTTGACCAATTGGCAGAGGACGAACTGCTCGAGGACGACGCCATGGGCGGCGAGGCGGACGAATGGGAAGGCATGGGGGAGGAGACGGAGATGGACAGCCAAATGGCACTTTGA
Protein sequence:
MRAVLFLAMVCLVMAVILETANSKAVKKDNKKGAITTPAKGKAAPKGAAKGGIKKDAKSKGKGKKDAKGKKDKKAKPAKGKASPKNDKKPPAAKANDKKSPTKPMAAVKAVPKAAENAQKGPSSAEVVAEESNLDTEAVDDLGVGPEAVDDLGAEESDFDQLAEDELLEDDAMGGEADEWEGMGEETEMDSQMAL
Loading ...
Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
20249.1 | 195 | 5.81 | -0.724 | 26.23 |
Plant infestation information
Experimental plant: Arabidopsis thaliana (related: thale cress) | |
Susceptible plant: Glycine max | Disease name: Soybean cyst |
Host classification: Eudicots | NCBI Species: 3847 |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|---|---|---|---|
Q9FVE6
|
Histone deacetylase HDT1
|
HDT1
|
Arabidopsis thaliana (related: thale cress)
|
MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGECKNKKGEFVPLHVKVGNQNLVLGTLSTENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYKTPNIEPQGYSEEEEEEEEEVPAGNAAKAVAKPKAKPAEVKPAVDDEEDESDSDGMDEDDSDGEDSEEEEPTPKKPASSKKRANETTPKAPVSAKKAKVAVTPQKTDEKKKGGKAANQSPKSASQVSCGSCKKTFNSGNALESHNKAKHAAAK
|
Q93ZG9
|
Peptidyl-prolyl cis-trans isomerase FKBP53
|
FKBP53
|
Arabidopsis thaliana (related: thale cress)
|
MGFWGLEVKPGKPQAYNPKNEQGKIHVTQATLGTGLSKEKSVIQCSIGDKAPIALCSLLPNKIECCPLNLEFDDDDEPVEFTVTGDRSIHLSGFLEYYQDDEDDYEHDEDDSDGIDVGESEEDDSCEYDSEEDEQLDEFEDFLDSNLERYRNAAAPKSGVIIEEIEDEEKPAKDNKAKQTKKKSQASEGENAKKQIVAIEGAHVPVLESEDEDEDGLPIPKGKSSEVENASGEKMVVDNDEQGSNKKRKAKAAEQDDGQESANKSKKKKNQKEKKKGENVLNEEAGQVQTGNVLKKQDISQISSNTKAQDGTANNAMSESSKTPDKSAEKKTKNKKKKKPSDEAAEISGTVEKQTPADSKSSQVRTYPNGLIVEELSMGKPNGKRADPGKTVSVRYIGKLQKNGKIFDSNIGKSPFKFRLGIGSVIKGWDVGVNGMRVGDKRKLTIPPSMGYGVKGAGGQIPPNSWLTFDVELINVQ
|
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: