Effector profile
| PlantPEAD ID: PlantPEAD01117 | Uniprot ID: A0A2Z5E4C0 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 97005 | Pathogen type: Nematoda |
| Species: Heterodera schachtii | Strain: | Other name: Sugarbeet cyst nematode, Tylenchus schachtii |
| Gene name: 30D08 | NCBI Gene ID: MF959551 | |
| Entry name: A0A2Z5E4C0_HETSC | Protein name: 30D08 protein | |
| DOI: 10.1111/nph.15179 | ||
Gene/Protein information
Gene sequence:
ATGGCCACTTACCTATTCATCGCTGCTGCTGCCTTCGGAGCAGGAATTTACTGTTGGAAGGCGTACCTCGGCCCGATGCTCGACCAACCGAAGAGCGACGACGAGGAAAAGCCCAAGCAGGAAGGAGGCGAAGAAGCGACGACCGCCGGCGACAAGGAGGAGAAGAAGGCTGGCAGCAAGGGCGACAAGCACAAGAAGAAGGACAAGAAGGGCGAAGGCGCAGCAGCAGCACCAGCGGCGGACAAAAAGGAGGAGAAGCGCAAGGACAAACACCGATCAAAGGAGGCGGGGAAGAGCGACGACAGCAAAGCGGGCAAGAAGGACAAGCACGGGAAGAAGGACAAGAAGGGCAAGAAGAAGGACACCGCCGATGCATCCACCGTGGACGAAGCGCTGGGAGAACAGAGCACAGCGGAGACGAGCCAAGCAGAGGAATAG
Protein sequence:
MATYLFIAAAAFGAGIYCWKAYLGPMLDQPKSDDEEKPKQEGGEEATTAGDKEEKKAGSKGDKHKKKDKKGEGAAAAPAADKKEEKRKDKHRSKEAGKSDDSKAGKKDKHGKKDKKGKKKDTADASTVDEALGEQSTAETSQAEE
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 15545.2 | 145 | 8.7 | -1.467 | 28.87 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress) | |
| Susceptible plant: Beta vulgaris | Disease name: Sugarbeet cyst |
| Host classification: Eudicots | NCBI Species: 161934 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|---|---|---|---|
|
O48713
|
Suppressor of mec-8 and unc-52 protein homolog 2
|
SMU2
|
Arabidopsis thaliana (related: thale cress)
|
MKPSKSHHKEKTARRREEKLEESDNPKYRDRAKERRENQNPDYDPSELSSFHAVAPPGAVDIRAADALKISIENSKYLGGDVEHTHLVKGLDYALLNKVRSEIVKKPDGEDGDGGKTSAPKEDQRVTFRTIAAKSVYQWIVKPQTIIKSNEMFLPGRMTFVYDMEGGYTHDIPTTLYRSKADCPVPEEFVTVNVDGSVLDRIAKIMSYLRLGSSGKVLKKKKKEKDGKGKMSTIANDYDEDDNKSKIENGSSVNISDREVLPPPPPLPPGINHLDLSTKQEEPPVARTDDDDIFVGEGVDYTVPGKDVTQSPISEDMEESPRDKEKVSYFDEPAYGPVQEKVPYFAEPAYGPVQPSAGQEWQDMSAYGAMQTQGLAPGYPGEWQEYQYAEQTGYQEQYLQPGMEGYEVQPETDVLLDPQLMSQEEKDRGLGSVFKRDDQRLQQLRESDAREKDPTFVSESYSECYPGYQEYNHEIVGSDEEPDLSKMDMGGKAKGGLHRWDFETEEEWEKYNEQKEAMPKAAFQFGVKMQDGRKTRKQNRDRDQKLNNELHQINKILTRKKMEKEGGDVASLDAAEAQTPKRSKH
|
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: