Effector profile
| PlantPEAD ID: PlantPEAD01118 | Uniprot ID: A0A7U7JE37 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 305 | Pathogen type: Bacteria |
| Species: Ralstonia solanacearum | Strain: IPO1609 | Other name: Ralstonia nicotianae, Pseudomonas solanacearum |
| Gene name: RipAB | NCBI Gene ID: CP012688 | |
| Entry name: A0A7U7JE37_RALSL | Protein name: Type III effector protein RipAB (Formerly PopB) | |
| DOI: 10.1111/mpp.12774 | ||
Gene/Protein information
Gene sequence:
ATGAGCCACAGCAAAATCAGGTCGGGCGGCAGCAGCGGCGGGATCGGCAACGATTTCCCGTCGACGAAGGTGCCCGTTCCTTCCACGCCCACCCAGCAGCCGTCGCAGCTCAACGACCTGCTCAACCGCGGCGTCGGCAACGCGATGAACAACGCCGGTTTCGGATCGAAGACCTCGCAGACCTGGAACCCGGACAACCCGATCGTTTCGCTCAAATCGCGCTCGTCGTCGGGCCGCAAGCCCGACACAGGCGGCGATACGAAGCCGGAATCGACCTCCGGCGGCAAGCGCAAGCGTGACGAAGAGACCGATCCGAACAACGAAGCCGACGGCAAGAAGAAGAAAAAGAAGCGCGACGACGAGGACAATGCCAGCCAGAACGGCGCCGGCAGCCCGACCGGACAGTCGGGATCGACCCCGGAGGATGCGCTGATGAATATCGTCCTGCAACGCACCATCCAGCGTCAGACGCAGACGCGGCAGAAGATGCAGGAGGCCATGAAGATCAAGGACGAAGACGATTGA
Protein sequence:
MSHSKIRSGGSSGGIGNDFPSTKVPVPSTPTQQPSQLNDLLNRGVGNAMNNAGFGSKTSQTWNPDNPIVSLKSRSSSGRKPDTGGDTKPESTSGGKRKRDEETDPNNEADGKKKKKKRDDEDNASQNGAGSPTGQSGSTPEDALMNIVLQRTIQRQTQTRQKMQEAMKIKDEDD
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 18657.3 | 174 | 9.33 | -1.37 | 51.3 |
Plant infestation information
| Experimental plant: Solanum tuberosum (related: potato) | |
| Susceptible plant: Solanum melongena, Solanum lycopersicum, Solanum tuberosum | Disease name: Bacterial wilt |
| Host classification: Eudicots | NCBI Species: 4111, 4081, 4113 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: