Effector profile
| PlantPEAD ID: PlantPEAD01125 | Uniprot ID: NONE | Source: Article |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. atrofaciens strain DSM5025 | Other name: |
| Gene name: 4465_Paf DSM5025 | NCBI Gene ID: NONE | |
| Entry name: | Protein name: | |
| DOI: 10.1126/science.1203659 | ||
Gene/Protein information
Gene sequence:
ATGAGCATCGGTATCAACTCCTCCACCTCCTACCAACCCGCTTCAACCCAGCTGGACTTCTCGGCGCTGAGCGGCAAAAGCCCGCAGACCAATACGTTCAGCGAGGAGAGCACTGCACAGGCCGTCGACCCGAGTGCCCTGCTGTTCGACACTGCCAGCCAGAAAGACGTCAGTTTCGGAAAACCCGACAATACGGTTCAAAGCCCCACCGACAGCAGTGCTGCAACTGACCCTCAATCCAACGTCGTCAAGCTGCTCAGCGCGCTCGTCACATCGCTGCTGCAAATGCTCATGAACCTTAATAAAAAACAGGACACGGGTCAGGACGCCAACGAGTGGCAAGACCCGTTTCAAAACAATGGCGGACTCGGTACGCCATCGACCGAAGGCGGTGGCGGTGGTACTGAGGCGGCTTCAAGCGGGGACGACGGCGGAGGCGGCACTGAGGCGACTTCAGGCGGGGACGACGGCGGCGGTACAACGGCAGCGTCGGGTGGTGGCGATGGTGGCGGTACATCCCCGACCACTGAAGGTGACGGTGGCGGCAGCTATGCGTCCACCGGCACAGAGGGCAGCGGCACGCCTTCGACCGACAACGGAAGCGACAGCGGTGATGGCGTAACACCTCAAGTCACCCCACAACTGGCCAACCCTGGCCGCAACTCGGGCAACGGCACGGTTTCGGATACAGCGGGCTCTCTTGAGCAATCCGGCGAAGTCAATGTCGTGAAAGACACCATCAAAGTAGGTGCTGGCCAGGTGTTTGACGGTCACGGTGCAACCTTTACCGCCGACAAGTCGATGGGCACCGGCGACCAGGACGAACATCAGAAGCCCCTGTTCGAACTGGCCGAAGGCGCGGTGCTGAAAAACGTGAACCTGGGTGAGAACGAAGCCGACGGCATCCACGTGAATGCCAAAAATTCGGAGCAAGTCACCATTGATAACGTGCACGCCCAGAACGTCGGTGAAGACATGATCACCGTCAAGGGTGAAGGAGGCGCAAAGGTCACCAACCTGAACATCACTAACAGCAGCGCCAACAGTGCCGATGACAAGGTCATTCAGCTCAATGCCGATACCCACCTGAAAGTCGACGGTTTCAAGGCCACCGATTTCGGCACGCTGGTCCGTACCAATGGTGGCAAGCAGTTTGATGACATGAGTGTCGAGGGGAATGCCATGCACGCAACCGACGGTTCATGTGCACTCGCAAATAGCTACAGCAACGATCTGAAACTGGCCACTGGCGACATCGCCATGACCGACGTCAAACACGCCTATGACAAGACCAAGGCGTCTACCCAGCACACCGAGCTCTGA
Protein sequence:
MSIGINSSTSYQPASTQLDFSALSGKSPQTNTFSEESTAQAVDPSALLFDTASQKDVSFGKPDNTVQSPTDSSAATDPQSNVVKLLSALVTSLLQMLMNLNKKQDTGQDANEWQDPFQNNGGLGTPSTEGGGGGTEAASSGDDGGGGTEATSGGDDGGGTTAASGGGDGGGTSPTTEGDGGGSYASTGTEGSGTPSTDNGSDSGDGVTPQVTPQLANPGRNSGNGTVSDTAGSLEQSGEVNVVKDTIKVGAGQVFDGHGATFTADKSMGTGDQDEHQKPLFELAEGAVLKNVNLGENEADGIHVNAKNSEQVTIDNVHAQNVGEDMITVKGEGGAKVTNLNITNSSANSADDKVIQLNADTHLKVDGFKATDFGTLVRTNGGKQFDDMSVEGNAMHATDGSCALANSYSNDLKLATGDIAMTDVKHAYDKTKASTQHTEL*
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 44447.5 | 441 | 4.24 | -0.607 | 27.54 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress) | |
| Susceptible plant: Arabidopsis thaliana | Disease name: NONE |
| Host classification: Eudicots | NCBI Species: 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: