Effector profile
| PlantPEAD ID: PlantPEAD01131 | Uniprot ID: NONE | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 272952 | Pathogen type: Oomycota |
| Species: Hyaloperonospora arabidopsidis | Strain: | Other name: Peronospora arabidopsidis |
| Gene name: CRN4b | NCBI Gene ID: NONE | |
| Entry name: | Protein name: | |
| DOI: 10.1016/j.chom. 2014.08.004 | ||
Gene/Protein information
Gene sequence:
ATGGTCAAAATTGACACGAACGAAGTGGTGGGGATCTTGAAGAAAGCGATAAAGGAGGATAACGCAGTGGATGTCCGGTGCGATGCTAGAAAGCTGCGGCTCTTCCTGGCGAAAAAAGATGGGGTGTGGCTGCGAGACGACGGTGATTTGGACAAACTGATTCAGACCGAAGGATTTCTTGATGGGATGGAGGAGATGCACGCTTCGTGGCGATTAGGAAAGCCCAGTCTGTTTGATTCCGGTCTTTTTCTTGAAGAAGACGTTGTCCACGTGCTGGTGGTGCTTCCGCGGACTATGGCTAGTCCGTTAGGCGAGTCGATTACTGTGGGCGGTGTCACGATTCCCGTCACGTCTACCATGATGAATTCACCACGGGTCGATTTCTGGAAAGCTCTTCAAAAGATAAAAACCCCGGTCGTAGCGGACTCAGTGATCACGTTACCCGGGAAAACATTAATTTTGAATCAACCCGAGTTTGGCTCCTGTATATACATTCGTCCGTGCTACCTGCAGCTATGGGACATGTGTCGGAGCATTTTTGACGATAAAAAAAAGACCTATCTGCGGCTTGTCATTCTCGGCAACCCAGGAATCGGCAAGACTTTTTTCGGCTTTTTAGTCTTGCTCTATCTTGCACGTGATAGAAAAACAGTGGTTTACGAGAATGTTCATCCGGAGTGGGAGCGCACTCTATTTTCAGGCGACATGGTAATAAAGGGATCGCACATGGATTTCTCTGAAGTTCTTCTGCAGCCCGAAACGTTTTATGTGGTGGATGGCGTCAGACCATCTCTCTACGTAGCGAAGACCATTCTTGTCACGTCGCCACGCACAGAGATTTGGCAAAAATTTGAGCAGGGAAGCTGCGAGATGTTATTCATGCCAGTCTGGACGCCGGAAGAGATTTTTAGGTGTCGTGAGCTACTGTATTCGAGTACACCCGTGGAGATTGTAGAGGATCGGTATCTCAAATGGGGAGGCATTGCACGCTATGTTTTTTTGCGACATGCACAGAATTTGAGAAAACAGCAAGCGCTTGATCAAGCGATTGCTAAAGCTGATTTGAAGATGACAGTAAGTGCGAGTATAGAGTCAACCGGGGCGGAGAGTGATGTTTGTCATCGGTTGCTCCACTTTCGTGTCAACCGGGAGTCTTTGTGTCATGAGAGTTTTGACTTCGGATCGGTGTACATTGCCCAGAGAGTTTTTGCTACGCTGTACAAACGTACTAGGAGGGACCTGATAGATTTTATTGCTGCTTCTCATCAATTCAGCGATGTTGCAGGGCAACGGGGAATTCTCTTCGAGCGATTGGCGCTTTCCATGCTGTCGCAAGGTGGATCATTTGAAGTTCGGTGCTTGACCAAAGAAGGGAAAGATTATGCTACAGGTGAAGACGAAGATGAGAGCAAGTCAGAATGCGTTGGTGATGATGACGGTGATGGACAACCGCGCGGCGTTTGA
Protein sequence:
MVKIDTNEVVGILKKAIKEDNAVDVRCDARKLRLFLAKKDGVWLRDDGDLDKLIQTEGFLDGMEEMHASWRLGKPSLFDSGLFLEEDVVHVLVVLPRTMASPLGESITVGGVTIPVTSTMMNSPRVDFWKALQKIKTPVVADSVITLPGKTLILNQPEFGSCIYIRPCYLQLWDMCRSIFDDKKKTYLRLVILGNPGIGKTFFGFLVLLYLARDRKTVVYENVHPEWERTLFSGDMVIKGSHMDFSEVLLQPETFYVVDGVRPSLYVAKTILVTSPRTEIWQKFEQGSCEMLFMPVWTPEEIFRCRELLYSSTPVEIVEDRYLKWGGIARYVFLRHAQNLRKQQALDQAIAKADLKMTVSASIESTGAESDVCHRLLHFRVNRESLCHESFDFGSVYIAQRVFATLYKRTRRDLIDFIAASHQFSDVAGQRGILFERLALSMLSQGGSFEVRCLTKEGKDYATGEDEDESKSECVGDDDGDGQPRGV
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 55217.6 | 487 | 5.74 | -0.135 | 39.92 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress) | |
| Susceptible plant: Arabidopsis thaliana | Disease name: Downy mildew of Arabidopsis |
| Host classification: Eudicots | NCBI Species: 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|---|---|---|---|
|
Q93Z00
|
Transcription factor TCP14
|
TCP14
|
Arabidopsis thaliana (related: thale cress)
|
MQKPTSSILNVIMDGGDSVGGGGGDDHHRHLHHHHRPTFPFQLLGKHDPDDNHQQQPSPSSSSSLFSLHQHQQLSQSQPQSQSQKSQPQTTQKELLQTQEESAVVAAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTSLNISLRSSGSSMSLPSHFRSAASTFSPNNIFSPAMLQQQQQQQRGGGVGFHHPHLQGRAPTSSLFPGIDNFTPTTSFLNFHNPTKQEGDQDSEELNSEKKRRIQTTSDLHQQQQQHQHDQIGGYTLQSSNSGSTATAAAAQQIPGNFWMVAAAAAAGGGGGNNNQTGGLMTASIGTGGGGGEPVWTFPSINTAAAALYRSGVSGVPSGAVSSGLHFMNFAAPMAFLTGQQQLATTSNHEINEDSNNNEGGRSDGGGDHHNTQRHHHHQQQHHHNILSGLNQYGRQVSGDSQASGSLGGGDEEDQQD
|
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: