Effector profile
PlantPEAD ID: PlantPEAD01162 Uniprot ID: NONE Source: Article
Localization: Unknown Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. phaseolicola strain 1448A / Race 6 Other name: Pseudomonas savastanoi pv. phaseolicola
Gene name: HopV1_Pph 1448A NCBI Gene ID: NONE
Entry name: Protein name:
DOI: 10.1126/science.1203659
Gene/Protein information
Gene sequence:
ATGACTTTCTCGCACTGGACAAGACCCGATTCGAAAATCTGCTGGCTAACTTTGCCGAAACAACGCAGGAGTTGCGTAACACCGCGCAGCGCCTGCGTTAGCGCTGAGGACAGAGCCCATGTTGAACAAGCCGACGTTGAACGGGATTGCCCCTACCGCACAAGCCGCTGCTTCCCATGCCGTCGAGGGCCCCACAAGCCCCACGCCAATGCGACTGGATGCAGCGCAAGGTCAGCGACCACTGCCACCGATGGACGCGCCATCGTCGTTACGCCTACGAGCGTCCGGCACATCGTCAGGTGGAGAACCGCAGGCGGCTCAGGAAAACTCAGGCAGCGGGCTGCAGACAACAATGGAGCTGCACGCGCCCAGCGAGAGCCGGGGATTGATCCAGTCAGGTTTTCTGTGAAACTGATGGTAGGAACCCTTGCGCTCTCGACAGGATGTCGATTGACAAGGCATCCGGATGATTTTGCAAAAGATCCTGGAGGCAGTATATGGGCGGCCATGAGTTTAAAGCATCGCTCTTCTCAGAACGATCTGGATCAGGGAAACAGAACGGTTCTGGAGCGTTACGGCGCCTACATTCCCAAAGACAGTAACTGTTTCAAAGCAAAGGCAGACGTCACTCACGACATTCCCCCTGGCGTCGCAGGTCAGTGGAACGTTAAAACCCGTCAGGTGAAGCTGAACCCCAACATTGCGCTTGAAAGTCACCCGGCCGAGGTCGCAGGGCACGAGTTCATACACTGTTACACCCACCCGGAGTTCAGGGGTCGTCACATTGATCATCGGCACTGGAAAGCCTTGAACGAAGGCCTGACCACTCATCTGACGGAAAAACTACCCACGCCGAAACGCCTCTTGCCTATCCCTCTGGCCAAAGACCCCTATCACGGTTTCAAACTGGCCACAGGAGACTCATGGCCCGCTGCGGCGAAACGTATTGAAGGTGCTGTCGGCGAAGATACGCTGCTGAAAGCGTTCTTCGGCGGCGACGATGACGCCATCAGTGAAGTCGCCAAAGCCGCTGCCCAGATCTATCCCCGGCTTGCGTCAAGCCGCACCGAGCAGGAGTTGTACAGAGCCGGAATGATGCGCGGCTCGCAGCAATTGGCTGAGTGTTATGCCGGTGCCTTGCTCGCCAGCGGCCAGCCTTTGCCCGAGAGCTGGTCACGCAATATGCTCCCGGTGTTCAGTTTCTCGGACATGCAACCCGAGCAGGCGAAAAAGGCGCGATTGCAAGCAGAGCAGAGCCAGGAGCGAATGGGCATCATATTTGACGCGGCATTTTTCTCACCAGACCTGAAGACCCAACGACAGGCATTGGGCATGCTGCGCGAAGATCTACTGATGCACTGGGAAAACGTTGTGCCCGATAAAGGCTGCCCCATCGAAGCCCTCGCTTTAAAGGCTACCGGGAAGGAAAGGTGCTCAAGCCCGCCTGGCCGCTACCGCTTCCACTTCGATCAGCGCACCGGGCAACGGCAGCGCCACTACCTGCAAAGCGGTGCGCGCAGGTTTCAAGGGTTGCTCGGGGGTGCCGAAAAACTGCGTGTAACCGGCCTGCAGGCCTGCAAAGTCAAGCTTGCCGCCGGTTTCCTCGGCCCCCACCAGAAACACCCGCAACTGCACGATATCGCCCAGATCAAGGTCCTGTTGCCGGAGCATATTGCGCAGTTTGTTGAACACCGAAACAGTCTGGACCTCAGTATTCCCGTATGCGGCAGGCGTACCCGCCGCGGCGTGTGGGTCAGCGAGGTCAGGCAGGGTGCCGCTGATGAACACCAGGCTGGCCGAGGCAGGCACGGTCACGGTTTGCGAGATTGGAAAATCGCCGACGCTGGTACGTTGAATGCTGTCGCTCATGGTGTCACTCCTCAATGGATGTTGATGCTGCAATAA
Protein sequence:
MTFSHWTRPDSKICWLTLPKQRRSCVTPRSACVSAEDRAHVEQADVERDCPYRTSRCFPCRRGPHKPHANATGCSARSATTATDGRAIVVTPTSVRHIVRWRTAGGSGKLRQRAADNNGAARAQREPGIDPVRFSVKLMVGTLALSTGCRLTRHPDDFAKDPGGSIWAAMSLKHRSSQNDLDQGNRTVLERYGAYIPKDSNCFKAKADVTHDIPPGVAGQWNVKTRQVKLNPNIALESHPAEVAGHEFIHCYTHPEFRGRHIDHRHWKALNEGLTTHLTEKLPTPKRLLPIPLAKDPYHGFKLATGDSWPAAAKRIEGAVGEDTLLKAFFGGDDDAISEVAKAAAQIYPRLASSRTEQELYRAGMMRGSQQLAECYAGALLASGQPLPESWSRNMLPVFSFSDMQPEQAKKARLQAEQSQERMGIIFDAAFFSPDLKTQRQALGMLREDLLMHWENVVPDKGCPIEALALKATGKERCSSPPGRYRFHFDQRTGQRQRHYLQSGARRFQGLLGGAEKLRVTGLQACKVKLAAGFLGPHQKHPQLHDIAQIKVLLPEHIAQFVEHRNSLDLSIPVCGRRTRRGVWVSEVRQGAADEHQAGRGRHGHGLRDWKIADAGTLNAVAHGVTPQWMLMLQ
Protein structure:
NONE
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
70444.2 634 9.67 -0.553 43.87
Plant infestation information
Experimental plant: Arabidopsis thaliana (related: thale cress)
Susceptible plant: Phaseolus vulgaris Disease name: Halo blight of bean
Host classification: Eudicots NCBI Species: 3885
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
Q9SCK1
Protein RESPONSE TO LOW SULFUR 1
LSU1
Arabidopsis thaliana (related: thale cress)
MANRGGCVTVAAEEMDELRRRNIELSREVAEMKTEMIKLWQRTVVAEEAEEQLCSQLAELEVESLEQARDYHDRMLFLMDQISRLSSSSVVSSS
Q9SCK2
Protein RESPONSE TO LOW SULFUR 3
LSU3
Arabidopsis thaliana (related: thale cress)
MGKGGGYVTVAAEEVEELRRRNGELEREMEEMKKEMVQLWRRTVVAEEAEERLCSQLAELEVESLDQARDYHSRIVFLMDQISRLSSSSLEVVVTNS