Effector profile
PlantPEAD ID: PlantPEAD01165 Uniprot ID: NONE Source: Article
Localization: Unknown Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: Ptt DSM5022 Other name:
Gene name: HOPBC1 NCBI Gene ID: NONE
Entry name: Protein name:
DOI: 10.1126/science.1203659
Gene/Protein information
Gene sequence:
GTGTTCAGGATCAATACCGGATCGTCGTCATATAACGTTCAAAGTTCCGCATCCTCTGAAGGTTCTGAGGGCGTAAAGTCGTATGGTTTGCATGATAATTTAAATGTAAGGGCCAACACCACAAAGGTCACTGATTATGTGGGTACCAAGGCCGCCAATCAGATTCCTTGCCTTCTAAGCAACGCGACGTTCCAGGGCGACGTTATATCCGTAGCAAACTCAATGGCGGTCCTTGCTGCGATGGGGCAAGGGCACGGTAATGTTATTGTCGCCGACCTGGATAAGGCACACCTTGCCGGCGTGCAATCAGTCCTCGCAATTGCTCAATCATCTGGCAGTCAAGAGGCGTGGTTGAGAGAGGTGAAACGCCAGCATAAGTCCGGCTATGCAGATCATCTTGAACTATTGATACAACGCAATCAGGAGCATCTGTCATTCGACTCGTTAAAGCAGCGCCTGCATCGCGGAGGCGTCAGCCTCGTCCGGGCAGATATGGCCAGTGACAGCGCAACAGAGTTGGCCGGGCTGGCCCCGCATGGCGTATCCGGAATGTACGTGAGTAATATTGAAATGTACCTCGGCGGTTTTCTTGATAAAGCCAACACTTCCATCAACGAGAGGCAGCAGGCACTGAACACGTTCAAGAATAATATCGTCTCGCTTATGGGGGCCGAGGCATTTCTTATTCGTGGCGAATCGGTAGGTATGCAGGTTCACAATAAGAATGCCGCTATCAACGACTGGATACCCCAAGTCCGTTAA
Protein sequence:
VFRINTGSSSYNVQSSASSEGSEGVKSYGLHDNLNVRANTTKVTDYVGTKAANQIPCLLSNATFQGDVISVANSMAVLAAMGQGHGNVIVADLDKAHLAGVQSVLAIAQSSGSQEAWLREVKRQHKSGYADHLELLIQRNQEHLSFDSLKQRLHRGGVSLVRADMASDSATELAGLAPHGVSGMYVSNIEMYLGGFLDKANTSINERQQALNTFKNNIVSLMGAEAFLIRGESVGMQVHNKNAAINDWIPQVR
Protein structure:
NONE
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
27152.5 253 6.82 -0.195 35.95
Plant infestation information
Experimental plant: Arabidopsis thaliana (related: thale cress)
Susceptible plant: Arabidopsis thaliana Disease name: NONE
Host classification: Eudicots NCBI Species: 3702
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.