Effector profile
PlantPEAD ID: PlantPEAD01171 Uniprot ID: NONE Source: Article
Localization: Unknown Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. phaseolicola strain 1302A / Race 4 Other name: Pseudomonas savastanoi pv. phaseolicola
Gene name: HopAR1_Pph 1302A_CatalyticDead NCBI Gene ID: NONE
Entry name: Protein name:
DOI: 10.1126/science.1203659
Gene/Protein information
Gene sequence:
ATGGGGTGTGCATCCTCTTCAGGCGTAAGTCTAGAAGATGATTCTCACACGCAAGTAAGCTTGAGTGATTTTTCTGTGGCTTCAAGAGATGTTAATCATAACAATATTAGTGCCGGCCTCTCCACGGAGTGGCTTGTAATGAGTAGTGACGGAGATGCAGAATCACGCATGGACCATCTCGACTATAACGGAGAGGGACAAAGCAGGGGAAGCGAAAGGCATCAGGTTTATAATGATGCGTTAGCTGCCGCACTATCAAATGATGATGAAGCACCTTTTTTCACAGCCAGTACCGCTGTTATCGAAGATGCTGGTTTCTCTCTACGCAGGGAACCAAAAACTGTTCATGCGTCAGGTGGCAGTGCGCAATTGGGCCAGACAGTAGCCCATGATGTAGCTCAATCTGGTAGAAAACATTTGCTGAGCTTACGTTTTGCAAACGTTCAAGGACACGCAATCGCGTGCTCCTGTGAGGGAAGTCAGTTCAAGCTGTTTGACCCTAACCTCGGTGAGTTTCAATCATCCCGCAGCGCAGCACCGCAGCTCATTAAGGGCTTAATAGATCACTATAATAGCTTAAACTACGACGTAGCTTGCGTAAACGAGTTTAGAGTTTCG
Protein sequence:
MGCASSSGVSLEDDSHTQVSLSDFSVASRDVNHNNISAGLSTEWLVMSSDGDAESRMDHLDYNGEGQSRGSERHQVYNDALAAALSNDDEAPFFTASTAVIEDAGFSLRREPKTVHASGGSAQLGQTVAHDVAQSGRKHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGEFQSSRSAAPQLIKGLIDHYNSLNYDVACVNEFRVS
Protein structure:
NONE
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
22056 206 4.92 -0.379 53.33
Plant infestation information
Experimental plant: Arabidopsis thaliana (related: thale cress)
Susceptible plant: Phaseolus vulgaris Disease name: Halo blight of bean
Host classification: Eudicots NCBI Species: 3885
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
Q8LAZ7
COP9 signalosome complex subunit 5a
CSN5A
Arabidopsis thaliana (related: thale cress)
MEGSSSAIARKTWELENNILPVEPTDSASDSIFHYDDASQAKIQQEKPWASDPNYFKRVHISALALLKMVVHARSGGTIEIMGLMQGKTEGDTIIVMDAFALPVEGTETRVNAQSDAYEYMVEYSQTSKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQYQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGHKISDDHVSEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAESQLANSRYGGIAPAGHQRRKEDEPQLAKITRDSAKITVEQVHGLMSQVIKDILFNSARQSKKSADDSSDPEPMITS