Effector profile
PlantPEAD ID: PlantPEAD01175 Uniprot ID: NONE Source: Article
Localization: Unknown Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. syringae strain B728a Other name:
Gene name: HOPAA1 NCBI Gene ID: NONE
Entry name: Protein name:
DOI: 10.1126/science.1203659
Gene/Protein information
Gene sequence:
ATGGCGACCCCTACCAACAGCTGGAACCCCCGGCACTGTTGCGACCACACAGCCTTGTCGGTCCTCTTCGCTGACGGGCCCCCGGACGTTTGCAATTGCTATCACTCTCGGACCGACGCCTCATTGCCTTGCCTGTTCGCAAGCAAGTCGTCCGGCCAGACTCGTCTCGGCGCGTTGCTACGCAACTTAAGCAATAGAGAGGGAGTTTCAATGCACATCAACCGAACCGGCAGCTCGCAGCCCAGCATCGAGCTGGAGCGCTTTTATTCCGCATCGCAATCATTGGCCTCCAGTTCCGTACGCGAGCTCAGCCCTGCCGAACACGCTAATCTGCAAGCCATTACCGATTACCTGAAAGATCATGTATTCGCTGCGCACAAACTGCCGTTGAGTGAGTCGGCCGTCGATCAGGATGCCGTTCATGCGCACAACGAGCAACTCGACAAGATCATCGATGCTCGCGCCAGACGCTTGCTGGACGAGGGCGAAACGCCTGCCACCATTGCCGACACCTTCGCCAAGGCGGAGAAGTTCGACAGGATGGCAACCACCGCTTCGATCACGCTGCGCGCCACGCCGTTTGCCGCTGCGTCGGTGCTGCAATACATGCAGCCTGCCATCAACAAGGGCGACTGGCTGCCGATGCCGCTCAAACCCCTGACGCCATTTGTGTCCGGGGCGCTGTCCGGGATCATGGATCAGGTCGGCACTACGGTCATGAATCGCGCCACGGGCAACCTGCACTACCTGAGTACCCCGCCTGAGAAACTGCATGATGCGATGGCGGCTTCCGTGAAGCGTCATTCGCCGGGTGTCATGCGTCAGGCGGTGGATCTGGGTATTGCCATCCAGGCTTACAGCGCGCGAAATGCGGTGCGTACCGTGCTGGCGCCAGCACTGGCATCCAGACCCGCCGTGCAGGGTGCGGTCGACATCAGCGTGTCGGCGGCAGGTGGCCTGGCGGCCAACGCGGGGTTCGGCAATCGTATGCACAGTGTGCAGGCGCGTGATCACTTGCGCGGCGGTGCGTTCGTGCTCGGCATCAAGGACCAGGAACCCAAGGCAGACTTGAGTGAAGAAACCGACTGGCTCGTGGCTTACAAAGCGATCAAGTCAGCCAGCTACTCCGGCGCGGCGCTGAACGCAGGCAAGCGGGTGGCTGGCCTGCCGCTGGACGTCGCCACCGACGGCCTGAAAGCGGTGAGAAGCCTGGTGTCGGCCACCGGTCTGGCGCAAAACGGGCTGGCCCTGGCAGGCGGCTTTGCCGGCGTGGGCAAATTGCAGGAGATGGCGACCAAAAATATCACTGATCCGGCCACCAAGGCGGCGGTCAGCCAACTGACCAATATGGCCGCCTCGACAGGCGTTTTTGCGGCCTGGACCACCGCAGCGGTCGCAACCGATCCCGCGGTGAAAAAAGCTGAGTCGTTCTTGCAGGATACGGTCAAATCGGCGGCGTCGAGTTCGACCAGCTATGTAGCTGACCAGACTGTCAAGCTGGCCAAGGCGGGCATTGACGCGAGTGGTGAGGCGATTGCTGCGACGGGGGCATCCTTGCTTGACACATTACGTCGTCGCAATGCTCGTGAGCCGGACATCGAAGAGGGTGGCATTGCAGCGGGTTCACCGAGCGCGGTGCCGTTCCAGCCAGGGCGCTCATAA
Protein sequence:
MATPTNSWNPRHCCDHTALSVLFADGPPDVCNCYHSRTDASLPCLFASKSSGQTRLGALLRNLSNREGVSMHINRTGSSQPSIELERFYSASQSLASSSVRELSPAEHANLQAITDYLKDHVFAAHKLPLSESAVDQDAVHAHNEQLDKIIDARARRLLDEGETPATIADTFAKAEKFDRMATTASITLRATPFAAASVLQYMQPAINKGDWLPMPLKPLTPFVSGALSGIMDQVGTTVMNRATGNLHYLSTPPEKLHDAMAASVKRHSPGVMRQAVDLGIAIQAYSARNAVRTVLAPALASRPAVQGAVDISVSAAGGLAANAGFGNRMHSVQARDHLRGGAFVLGIKDQEPKADLSEETDWLVAYKAIKSASYSGAALNAGKRVAGLPLDVATDGLKAVRSLVSATGLAQNGLALAGGFAGVGKLQEMATKNITDPATKAAVSQLTNMAASTGVFAAWTTAAVATDPAVKKAESFLQDTVKSAASSSTSYVADQTVKLAKAGIDASGEAIAATGASLLDTLRRRNAREPDIEEGGIAAGSPSAVPFQPGRS
Protein structure:
NONE
download
Loading ...
Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
57788.3 553 8.18 -0.112 44.04
Plant infestation information
Experimental plant: Arabidopsis thaliana (related: thale cress)
Susceptible plant: Arabidopsis thaliana Disease name: NONE
Host classification: Eudicots NCBI Species: 3702
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.