Effector profile
PlantPEAD ID: PlantPEAD01186 Uniprot ID: NONE Source: Article
Localization: Unknown Pathogen taxonomy ID: 339 Pathogen type: Bacteria
Species: Xanthomonas campestris Strain: pv. campestris Other name:
Gene name: AVRC NCBI Gene ID: NONE
Entry name: Protein name:
DOI: 10.1126/science.1203659
Gene/Protein information
Gene sequence:
ATGTGGTCTCAGCCCGTATGGAACCCTTATGCAAGCTTTGACACTGGCACAGCTTCTTCGCACTCTCAAGCAGTCCAAGGAACTGCTACAAACTATCTGCGCGGTCCAGCGAACTATTCCAAGCTTAGCTCAGAAGAACAAAGCTTAGTTGGTGCGGCGCGCTGGCCAGACGATGCACCCGGGCTTAACATTTCTAACAAAAGCAATACGCAGGACAATAAGAAATATTGCAAAAGCTTATATAAAGCATCACGCATTGCTGGTGGCTCAATAGCTTCTGGCCAGATTAATAGTTTTAATGATCTTTGGCAAAAAGCAACACAATGGCGCTTATCTAGAATTTCTTCCGGCGACGCATCAAAAGGCGACTTCGCTGCGGAGCGCATGCCCAATACCAGATTCGTTACTTCTTTGAGGCGGCCATATCACTCAGTGATAGAGCGGGCTAGAAATCATCCTGATGCGGAAACAGAACTATATGAAGGAGAATACTTTAAAGAAATTGAAGTCAAGGTGTATCGGCAGTGTGGAGCGATTTCAGGAGAAACTATCCCGATGACGACAGTCAGTGCGGCCGTGGATGATAATGCCATTAGTGCGAGGCTGCGGAACCTTCCGAAGGATAAACGCCAACAGGCAAGACAGAGTATGGCATCTTCACATCCTAACATGATCACTCATACTAGCGCTGAATATATTAAAACTATAAGAGATCATCTGGAGTCTCTGTACTTGCAAGCGATTGATCCATCGCTTGAGAAGCATGAGGCCTTTGAGCTAATAGCGCGACTGCACTGGTGGGCAGCAAGTGCAGCGCCAGATAAGCGCGGCAGTGCTGCGAAAGCCGAGTTCGCGGCAAGATCAATCGCCTCAGCTCATGGTATCGAAATGCCCCCATTCAGACATGGAATAGTTCCCGATATCGAGGCAATGCTTAGATCTGAGAGCCAATTTGTGGCTGATTATCCTAATTTTTTTGAGCGCCCCCCAATTTAA
Protein sequence:
MWSQPVWNPYASFDTGTASSHSQAVQGTATNYLRGPANYSKLSSEEQSLVGAARWPDDAPGLNISNKSNTQDNKKYCKSLYKASRIAGGSIASGQINSFNDLWQKATQWRLSRISSGDASKGDFAAERMPNTRFVTSLRRPYHSVIERARNHPDAETELYEGEYFKEIEVKVYRQCGAISGETIPMTTVSAAVDDNAISARLRNLPKDKRQQARQSMASSHPNMITHTSAEYIKTIRDHLESLYLQAIDPSLEKHEAFELIARLHWWAASAAPDKRGSAAKAEFAARSIASAHGIEMPPFRHGIVPDIEAMLRSESQFVADYPNFFERPPI
Protein structure:
NONE
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
36897.2 331 8.39 -0.605 46.98
Plant infestation information
Experimental plant: Arabidopsis thaliana (related: thale cress)
Susceptible plant: Brassica napus, Arabidopsis thaliana Disease name: Black rot
Host classification: Eudicots NCBI Species: 3708, 3702
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
Q9SCK2
Protein RESPONSE TO LOW SULFUR 3
LSU3
Arabidopsis thaliana (related: thale cress)
MGKGGGYVTVAAEEVEELRRRNGELEREMEEMKKEMVQLWRRTVVAEEAEERLCSQLAELEVESLDQARDYHSRIVFLMDQISRLSSSSLEVVVTNS