Effector profile
| PlantPEAD ID: PlantPEAD01212 | Uniprot ID: NONE | Source: Article |
| Localization: Unknown | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. tomato strain ATCC BAA-871 / DC3000 | Other name: Pseudomonas syringae tomato |
| Gene name: HopAJ2 | NCBI Gene ID: NONE | |
| Entry name: | Protein name: | |
| DOI: 10.1111/j.1365-2958.2006.05350.x | ||
Gene/Protein information
Gene sequence:
ATGCCTTCTCGTTTTACCCATCGCCCGCAGCTGCGCCAACTCATCGCTGCCTCCAGTCTTGTTGCCCTGGTAGCCTGCGCAGAAAAACCCACTGCAGCCGATGCCACACCTCTTCAATCCAGCAAGGTGCAGACAAACGCTCCTGCCGTAGCGCCTACGCCAGCACTGGTCGTTGATGACAACCTCACGATTCAGCCCGCCGTCAGCTTCAGCGAATGGCAGGCCGGCTTTCGTGCCCAGGCGTTGAAGGCAGGCATTCGCGCGGACGTATTCGATCTGGCATTTGCCGGCGTCACCCCCGACATGAGCGTAGTCAAGGCCGACCGCAGTCAGCCTGAATTCAGCCGCCCGGTCTGGGAATACCTTGACGGTGCCATCTCTGCCGCACGCGTACGCAAGGGTCAGGCGCTGCTGTCGCAGTATGCCGACGACCTGCAGAAGATCGAGCAGCAGTACGGCGTCGATCGTCAGACGCTGGTCGCGGTGTGGGGCATGGAAAGTAATTTCGGGTCGTTACAGGGTACGCAATCCGTCATTCGCTCACTCGCGACACTGGCCTATGAAGGTCGCCGTCCCGGCTTTGCACAAAGCCAGTTGCTCGCCGCGCTGGAAATCATCCAGCATGGCGACATAACCCCGGACAAAATGCTGGGTTCGTGGGCCGGTGCGATGGGCCAGACGCAGTTCATCCCTACCACCTACAACACCCACGCCGTGGATTTTGACGGCGATGGCCGACGTGATATCTGGAACACCCCGGCCGATGCCCTGGCCTCCACTGCGCACTACCTGCAAAGCTCCGGCTGGCAGCGTGGTCAGCCCTGGGGCTTTGAAGTGGTGCTCGGCTCGGGGTTCGATTACTCGCTGGCCGATTCGACAACCCGCAAGAGTCTCGTTGAATGGCAGCAACTGGGTCTGAAACAGCCCGACGGCTCAGCCATTCCGGTCGCCGCCAGCCAGCAGCAAGCCGCCTTGCTGTTGCCAGCCGGTTATCGCGGGCCAGCCTTTCTGGTGCTGGACAACTTCCGCGCGATTCTCAAGTACAACAACTCGACCTCCTACGCGTTGGCGATCAGCCTGCTCTCCGATCGCTTCAAGGGCGCGGGCTATGTCGTGGGCAGCTGGCCGCGCGGAGACCTGCCGCTGAGCCGCTCAGAGCGCATTGAGCTGCAAACCCTGCTCTCGGCACGCCAGTACGACGCAGGCGCGCCAGACGGCATTATCGGCGCCAATACACGCAAGGCCATCCGCAGTGCGCAGCAATCGCTCGGCTGGCCAGCCGATGGTTACCCGACGCATGAATTGCTGGAGAACCTGCGCAAGCCTGTCGGGCAGTAA
Protein sequence:
MPSRFTHRPQLRQLIAASSLVALVACAEKPTAADATPLQSSKVQTNAPAVAPTPALVVDDNLTIQPAVSFSEWQAGFRAQALKAGIRADVFDLAFAGVTPDMSVVKADRSQPEFSRPVWEYLDGAISAARVRKGQALLSQYADDLQKIEQQYGVDRQTLVAVWGMESNFGSLQGTQSVIRSLATLAYEGRRPGFAQSQLLAALEIIQHGDITPDKMLGSWAGAMGQTQFIPTTYNTHAVDFDGDGRRDIWNTPADALASTAHYLQSSGWQRGQPWGFEVVLGSGFDYSLADSTTRKSLVEWQQLGLKQPDGSAIPVAASQQQAALLLPAGYRGPAFLVLDNFRAILKYNNSTSYALAISLLSDRFKGAGYVVGSWPRGDLPLSRSERIELQTLLSARQYDAGAPDGIIGANTRKAIRSAQQSLGWPADGYPTHELLENLRKPVGQ
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 48146.3 | 445 | 6.54 | -0.21 | 43.47 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: Solanum lycopersicum, Arabidopsis thaliana | Disease name: Bacterial speck |
| Host classification: Eudicots | NCBI Species: 4081, 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: