Effector profile
| PlantPEAD ID: PlantPEAD01215 | Uniprot ID: NONE | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 27337 | Pathogen type: Fungi |
| Species: Verticillium dahliae | Strain: | Other name: Verticillium wilt |
| Gene name: VdSSR1 | NCBI Gene ID: NONE | |
| Entry name: | Protein name: | |
| DOI: 10.1073/pnas. 2114583119 | ||
Gene/Protein information
Gene sequence:
NONE
Protein sequence:
MSANMDRSLDEILAEKKSDQPRNRRRGGGGGHRDGGRDGGRDGGRDGGGRPYRRDERYDYPRDGVKKSYRDDSRHLDSEWVHDRYEEDYNPRRSAPRNRRESPGHLDPTSSKLKVENLHYELTTEELEGLFNNRIGPVVRLNLRYDRAGRSEGVAYVTYEHPDDARQAIREFDGANANGQPIRLSIVPNGRDSRTRGGRNPFDTAGPRRRRRSSTTRWRITLAGALLALPRLALLRRRPPLLLLMIWI
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 28492.7 | 248 | 10.45 | -1.215 | 71.48 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress)，Gossypium hirsutum (related: cotton) | |
| Susceptible plant: Gossypium hirsutum, Lactuca sativa, Solanum lycopersicum | Disease name: Vascular wilt |
| Host classification: Eudicots | NCBI Species: 3635, 4236, 4081 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|---|---|---|---|
|
Q8L773
|
THO complex subunit 4A
|
ALY1
|
Arabidopsis thaliana (related: thale cress)
|
MSTGLDMSLDDMIAKNRKSRGGAGPARGTGSGSGPGPTRRNNPNRKSTRSAPYQSAKAPESTWGHDMFSDRSEDHRSGRSSAGIETGTKLYISNLDYGVMNEDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEIVGTNLQTAAAPSGRPANGNSNGAPWRGGQGRGGQQRGGGRGGGGRGGGGRGRRPGKGPAEKISAEDLDADLDKYHSGDMETN
|
|
Q8L719
|
THO complex subunit 4B
|
ALY2
|
Arabidopsis thaliana (related: thale cress)
|
MSGGLDMSLDDIIKSNRKPTGSRGRGGIGGGNNTGGRGGSGSNSGPSRRFANRVGARTAPYSRPIQQQQAHDAMWQNDVFATDASVAAAFGHHQTAVVGGGSSIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYGIHYDRSGRSKGTAEVVFSRRGDALAAVKRYNNVQLDGKLMKIEIVGTNLSAPALPILATAQIPFPTNGILGNFNENFNGNFNGNFNGNFRGRGRGGFMGRPRGGGFGGGNFRGGRGARGRGGRGSGGRGRDENVSAEDLDAELDKYHKEAMETS
|
|
Q94EH8
|
THO complex subunit 4C
|
ALY3
|
Arabidopsis thaliana (related: thale cress)
|
MSDALNMTLDEIVKKSKSERSAAARSGGKGVSRKSGRGRGGPNGVVGGGRGGGPVRRGPLAVNTRPSSSFSINKLARRKRSLPWQNQNDLYEETLRAVGVSGVEVGTTVYITNLDQGVTNEDIRELYAEIGELKRYAIHYDKNGRPSGSAEVVYMRRSDAIQAMRKYNNVLLDGRPMKLEILGGNTESAPVAARVNVTGLNGRMKRSVFIGQGVRGGRVGRGRGSGPSGRRLPLQQNQQGGVTAGRGGFRGRGRGNGGGRGNKSGGRGGKKPVEKSAADLDKDLESYHAEAMNIS
|
|
Q6NQ72
|
THO complex subunit 4D
|
ALY4
|
Arabidopsis thaliana (related: thale cress)
|
MSGALNMTLDEIVKRGKTARSGGRGISRGRGRGRGGGGRGAGPARRGPLAVNARPSSFTINKPVRRVRSLPWQSGLFEDGLRAAGASGVEVGTRLHVTNLDQGVTNEDIRELFSEIGEVERYAIHYDKNGRPSGTAEVVYPRRSDAFQALKKYNNVLLDGRPMRLEILGGNNSSEAPLSGRVNVNVTGLNGRLKRTVVIQQGGGGRGRVRGGRGGRGPAPTVSRRLPIHNQQGGGMRGGRGGFRARGRGNGGRGRGGGRGNGKKPVEKSAADLDKDLESYHADAMNTS
|
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: