Effector profile
| PlantPEAD ID: PlantPEAD01217 | Uniprot ID: P15597 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 1176649 | Pathogen type: Bacteria |
| Species: Agrobacterium fabrum | Strain: A348 | Other name: Agrobacterium tumefaciens |
| Gene name: VirF | NCBI Gene ID: X13981 | |
| Entry name: VIRF_AGRT9 | Protein name: Virulence protein F | |
| DOI: 10.1371/journal.pone.0142128 | ||
Gene/Protein information
Gene sequence:
CTGCAGACGGACGAGCAGGCTCTGCGTCAGCGGGTCTCGATCGACATTCCGGCGCTGTCGCCGGTAGCGCGCGTCGTGCTGGAGCGGGTGCGTGACGCCATCGATCGAAACGACCTGCCAGCGGCGATAGCCTACGCGCTCAGCAATCGCGAAACAAAGCTCGAAATTGACGGGTTCAATCAGGCGGTCACCGAGCGGTTTGGAGAACGGACGCTGTTGAGCAACGCCGCACGCGAGCCCTCCGGAAAGCTGTACGAAAAGCTTTCCGAGGGTATGAAGCCGGAGCAGAAGGAGCAGCTCAAACATGCATGGCCGCTCATGCGGACAGGGCAACAGCTCGCGACCCACGAGCGCACTGTCCACTCGCTAAGAAAAGCCGAGGAACAGCGGCTCACACAACGGCAGACGCCGGTGATGAAGCAATGAGGCACAGGCGGGCTCTCCTGTTTCTGACAGGCGCCGCCGTCTTCGTGTCCGCACTGACTGCGGCCGCGATCACGGGTGGTTATCGGCTGAACCTGACCCCAAGCGAGCCGCTCGGCCTCTGGCGTATCGAACAGCTTCAGCGTCCGGTCGCTATCGGCGATCTTGTGTTTTTATGTCCGCCCTCGACAGCCGTCTTCGCAGAGGCACGAGTTCGCGGATATCTTCGGCGAGGTCTTTGTGCCGGTGGAGTTGCGCCGCTGATCAAGACTGTTGCGGCGCTCCCTGGGCAGCGTGTCGAAATCACCGATCACGTGCACATCGACGGCCGTTCGGTCCCCGCATCGTCGGTGAGCGGCACGGACGGCGATGGCAAGGTGCTCCTGCCTGATTCCGGCGGCGTGGTTCCGCCGCATCATCTGTTCCTTCACTCCTCCTTTGCGAGCTCCTATGATAGTCGATATTTTGGTCCGGTTCCGGATTCCGGTCTTCTCAGCCTGGCGCGGCCCGTGTTCACCTTCCACCCGTGATCGCGGTGACGATCATCTGGCTGATCGCTGGAAATCCGTGCTCCTGATCATCGCATCCATCGCCTGTGGGTGGATCGGCTGGAGCGGGGAGGTGCTTCTTCTTCCACCCGCCATGTTCTTTCCTTTGCTCTGGGCAATGGCGCCGTCACGTACGATCGCCACACTTGTTGCGGTGGGCTATTTCCTGGCGGCCTGCCGCGGTTTGCCACAGGGCGTGGCCAACTTCTATGCCACCGATCTTTGGCCCAGGCTGGTGCTTTGGGCGGTGGCTTCGGTGTCCGTTAATGACTGATCGTAAGAGAATAAAAGCGGCACTGACTAATGCAGGTAGGTTTTTCCTTTTGAGTATTCGCAACCAGTAACCTTTTTCTCGGCTGCGCCGAAAGATTGCCAGCAAAACGCTTTGCCGATGCCGAAGCTGATCTATTTTGCCACACAACTACAAATGAAACTGAAAACTTCTTAATAATCTGCACCCGCGTAGCATATCATCCTTTCAAAAGCACAGGAGCGATATCATGAGAAATTCGAGTTTGCGTGATGCATCTGGAAGCAATGATGCACAGGTTCCCCACAAAACAGAATTACTAAATTTGCCAGACCACGTGCTGACGGAAGTCGCCAAACGTCTAGCGACTAACAATCCTGTCGAGTCGGCTGAGAATATAGCTAATTTTAGCAAATCCCATCGTTTCACAAGGGACGCGGTTCGAACAGAACCTTTAGAAAAATTCTCTTCACGCCTCAAAATCCTCTCGCGAAACGCGAAATTGTTGTCTCATGCCGTGCGGCACGCAGCAACACTTCCAGATGGAGAACAATTAAGTGAAGCGCAACTGTCGCAAATGCGAAGTGAAGTCGCTACTCGCCCAGTCCTGGGCGTAGCGTATACCCATCAAGACGGTCAACCAGAAGAGAGGTTGTCAGGGAACCACTTGGACCATAAAATCAACAATATCCCTAACTTGGTCTTCAACGTTGCGGAACCGATTATGTTCAATGAAATCTCCGCTCTCGAGGTTATGGCAGAAGTTCGGCCCATAGCCCGATCCATTAAAACGGCTCACGACGATGCGCGAGCGGAATTAATGTCGGCGGACAGACCTCGATCAACGCGCGGTCTATGACTATCCGTGCTGTTCGTCACCCGCTTATAGTTGCCATCACAATCGGATTTCAACTGCCCCGGTCTTTAGGTGCGGCCGAGGACAATGTAGCACGCACTTACGGTGCGTCTCGTCTCTGACGCTTTCTATGTTCCGCATACGTGGGCCGACGAACATATGCAAGTACTCGCGACTGAAATTGCTTGACCCTAATAGATCCAACGCTCGCCGCGGCGCTATTGGTGTTTAAGCTTCCTGTCAGCATCAAATTTCTTGGGGCATAAAACCATAGGACCTTTGGTATCTAAGTGTGCTGGTCCCGGTGGGGTCGCGGAAGTTGTGATGAAACGTTGATAGCGCCATCCCAGAGAGCTTTGTTTTACAGTCTCCGGTGTGATCACAGCAGCAACAGGTTGACCGCAATGACGCTGCCATCGATAAAGCTGACCACATATCCTCAATCATGCTCACACCATGACGCGCTCGCCGAGCACCATGCAATAAGCCCCGTCATGAACGTAGTAATGTTGGAGATGACAGTAGTCGGCGGTGCGCGAGCAAATCAGGACGACAGATTTGCCTCGATCGCGCATATGATTCGATTCGCCCTACATTCGGCACAAGATGCGCAGATTGCGGTGGTGGACCTGATGACGGGTATATTCACCCTCCGCCGGGTTCGGCCCATCGTAGCAGCGCAAGGACTAACACCGCGATGATCGCGCTCTATGTTGATCGATCTCCGCTGCACGGAACGCGATCTAGTGGTGCACCTGAATCAGCCGCCTTAGACGTCAATTCCATTGTCATAAAAGTCACGAACAATAACAAGACGATCAGCAAATTCGAGCTCTATGCAAAGATCGCGATATTTGCTGACGGGAACAGAATTC
Protein sequence:
MRNSSLRDASGSNDAQVPHKTELLNLPDHVLTEVAKRLATNNPVESAENIANFSKSHRFTRDAVRTEPLEKFSSRLKILSRNAKLLSHAVRHAATLPDGEQLSEAQLSQMRSEVATRPVLGVAYTHQDGQPEERLSGNHLDHKINNIPNLVFNVAEPIMFNEISALEVMAEVRPIARSIKTAHDDARAELMSADRPRSTRGL
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 22437.3 | 202 | 7.16 | -0.554 | 49 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress) | |
| Susceptible plant: | Disease name: Crown gall |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|---|---|---|---|
|
Q8VZI9
|
Trihelix transcription factor ENAP1
|
ENAP1
|
Arabidopsis thaliana (related: thale cress)
|
METTPETQSKTHRLPAGREDWWSEDATATLIEAWGDRYVNLNRGNLRQNDWKEVADAVNSSHGNGRPKTDVQCKNRIDTLKKKYKTEKAKPLSNWCFFDRLDFLIGPVMKKSSGAVVKSALMNPNLNPTGSKSTGSSLDDDDDDDDDDEEDDDDAGDWGFVVRKHRKVEDVDSSEGSAFRELARSILKLGEAFERIEGKKQQMMIELEKQRMEVAKELELQRMNMLMEMQLELEKSKLGKRRAASGKKL
|
|
Q9FFG0
|
Trihelix transcription factor ENAP2
|
ENAP2
|
Arabidopsis thaliana (related: thale cress)
|
METTTPQSKSSVSHRPPLGREDWWSEEATATLVEAWGNRYVKLNHGNLRQNDWKDVADAVNSRHGDNSRKKTDLQCKNRVDTLKKKYKTEKAKLSPSTWRFYNRLDVLIGPVVKKSAGGVVKSAPFKNHLNPTGSNSTGSSLEDDDEDDDEVGDWEFVARKHPRVEEVDLSEGSTCRELATAILKFGEVYERIEGKKQQMMIELEKQRMEVTKEVELKRMNMLMEMQLEIEKSKHRKRASASGKKNSH
|
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: