Effector profile
| PlantPEAD ID: PlantPEAD01220 | Uniprot ID: Q4VKJ3 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 123356 | Pathogen type: Oomycota |
| Species: Hyaloperonospora parasitica | Strain: strain Emco5 | Other name: Peronospora parasitica |
| Gene name: ATR1(Emco5) | NCBI Gene ID: AY842881 | |
| Entry name: Q4VKJ3_9STRA | Protein name: Avirulence protein | |
| DOI: 10.1111/nph.13823 | ||
Gene/Protein information
Gene sequence:
ATGCGCGTCTGCTACTTCGTTCTCCTGCCCTCTGTTGCTCTGGCCGTCATAGCCACCGAGTCGTCGGAAACGTCCCGCACGATCGTCCACGTGTTCACCCTCCGTGACGTCGCCGACCATCGCAACGACGCTCTAATCAATCGGGCGTTGAGAGCGCAGGCAGCTCTCGATGACGATGAAGAGAGATGGCCGTTCGGGCCTCCGGCCGTCGAAGCGTTGATTAAAACCATCGACAGACATGGAGTCAGCTTGAATGATCATGAGGCTAAGATGAAGAAGGTCGAACAAACCTGGAAAAAACTAATCGAACGGGATAATTTGATTGGCGAGATAGGAAAACATTATAGTGAAGCGCCGGGGCCACTCTATGATACCTATGATGAAGCTCTCGCCACTAGGCTAGTAACAACCTATTCGGATCGCGGAGTAGCTCGGGCAATTCTACATACAAGGCCTTCGGACCCACTTTCGAAAAAGGCAGGGCAAGCGCACCGATTGGAGGAAGCAGTGGCATCACTATGGAAAGGGCGAGGATACACCTCAGACAATGTCGTTTCAAGCATTGCTACCGGCGACGATGTTGACTTTTTCGCACCCACGGCCTTCACTTTCCTAGTAAAGTGTGTCGAATCTAAGGTCGAAGCGAACTACGCCATATTCAAGTATTTTGGTAGTAATCCCAGCAGATACTTTTCCGCTGTGCTGCACGCGATGGAGAAGCCTGGTGCTGATATTCGAGAGCTTGACAACAGCAAAAATTGGATGTTTCGATTTTATGCGCATGCGCAGGAGCCGCTCTCTTCAACAGAATTTGAATCCATGCTGCCTCGTGTCCAGTCTGAAGAATATGCGATTCATGGTGCACAGAACGACTACGAGAAGCTCAGCTCCTCTCAAATCAAGGAACTCGTGAAAGAGTATTCGAGAATATATTCTGTTTAA
Protein sequence:
MRVCYFVLLPSVALAVIATESSETSRTIVHVFTLRDVADHRNDALINRALRAQAALDDDEERWPFGPPAVEALIKTIDRHGVSLNDHEAKMKKVEQTWKKLIERDNLIGEIGKHYSEAPGPLYDTYDEALATRLVTTYSDRGVARAILHTRPSDPLSKKAGQAHRLEEAVASLWKGRGYTSDNVVSSIATGDDVDFFAPTAFTFLVKCVESKVEANYAIFKYFGSNPSRYFSAVLHAMEKPGADIRELDNSKNWMFRFYAHAQEPLSSTEFESMLPRVQSEEYAIHGAQNDYEKLSSSQIKELVKEYSRIYSV
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 35317.8 | 313 | 5.84 | -0.385 | 38.31 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress) | |
| Susceptible plant: Arabidopsis thaliana | Disease name: Downy mildew of Arabidopsis |
| Host classification: Eudicots | NCBI Species: 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|---|---|---|---|
|
F4J339
|
Probable disease resistance protein RPP1
|
RPP1
|
Nicotiana benthamiana (no common name found)
|
MGSVMSLGCSKRKATNQDVDSESRKRRKICSTNDAENCRFIQDESSWKHPWSLCANRVISVAAVALTNFRFQQDNQESNSSSLSLPSPATSVSRNWKHDVFPSFHGADVRRTFLSHIMESFRRKGIDTFIDNNIERSKSIGPELKEAIKGSKIAIVLLSRKYASSSWCLDELAEIMKCRQMVGQIVMTIFYEVDPTDIKKQTGEFGKAFTKTCRGKPKEQVERWRKALEDVATIAGYHSHSWRNEADMIEKISTDVSNMLNSFTPSRDFDGLVGMRAHMDMLEQLLRLDLDEVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIMVNIKGCYPRPCFDEYSAQLQLQNQMLSQMINHKDIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALAKETRWFGPGSRIIITTEDLGVLKAHGINHVYKVEYPSNDEAFQIFCMNAFGQKQPHEGFDEIAWEVTCLAGELPLGLKVLGSALRGKSKREWERTLPRLKTSLDGKIGSIIQFSYDVLCDEDKYLFLYIACLFNGESTTKVKELLGKFLDVKQGLHLLAQKSLISFDGERIHMHTLLEQFGRETSRKQFVHHGFTKRQLLVGARGICEVLDDDTTDSRRFIGIHLELSNTEEELNISEKVLERVHDFHFVRIDASFQPERLQLALQDLIYHSPKIRSLNWYGYESLCLPSTFNPEFLVELDMRSSNLRKLWEGTKQLRNLKWMDLSYSSYLKELPNLSTATNLEELKLRNCSSLVELPSSIEKLTSLQILDLENCSSLEKLPAIENATKLRELKLQNCSSLIELPLSIGTATNLKQLNISGCSSLVKLPSSIGDITDLEVFDLSNCSSLVTLPSSIGNLQNLCKLIMRGCSKLEALPININLKSLDTLNLTDCSQLKSFPEISTHISELRLKGTAIKEVPLSIMSWSPLADFQISYFESLMEFPHAFDIITKLHLSKDIQEVPPWVKRMSRLRDLSLNNCNNLVSLPQLSDSLDYIYADNCKSLERLDCCFNNPEIRLYFPKCFKLNQEARDLIMHTCIDAMFPGTQVPACFIHRATSGDSLKIKLKESPLPTTLRFKACIMLVKVNEELMSYDQTPMIVDIVIRDEHNDLKEKIYPSIYPSIYPLLTEHIYTFELDVEEVTSTELVFEFPQLNKRNWKIGECGILQRETRSLRRSSSPDLSPESSRVSSYDHCLRGD
|
External Links
Interpro: IPR048935
Pfam: PF21421
SMART:
KEGG:
PRINTS: