Effector profile
| PlantPEAD ID: PlantPEAD01223 | Uniprot ID: A0A0K1LX77 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 6303 | Pathogen type: Nematoda |
| Species: Meloidogyne javanica | Strain: | Other name: Root-knot nematode worm |
| Gene name: TTL5 | NCBI Gene ID: KR604797 | |
| Entry name: A0A0K1LX77_MELJA | Protein name: Transthyretin-like protein | |
| DOI: 10.1111/nph.13701 | ||
Gene/Protein information
Gene sequence:
ATGTCATTATTTATTAAAAATATTTTAATTTTATTTACAACAATTTTATTTATTATTTTGAATAATTCCAATGTATTTATGAGAAAACAAGGAGTAGCCATTAGCGGAAGATTTATTTGTGGAAATACTTCGGCATTAAGTAATTCTACAAAAGTTAGAATTGTTGATATTGATACAGGTCCCGATCCAGACGATACTTTGGATGAAAAATTTGTTGATGCAACTGGGGCATTTAAATTAAATGGATATACTAGAGAATTAACTGATATAGACCCCGTTCTTTATGTTTGGACACGATGTTATTCATTGGAAGCTCCTTGTCATCGCAAAATTAAATTTTTAATTCCTAAAAAATTTATTATCGGAGAAGAACCTAAATTAAATGAATGGCTAGATATTGGAATAATTAATTTACAATCAACTTTTGAAGATGAAAAAAGAGAATGTATTTTTTAA
Protein sequence:
MSLFIKNILILFTTILFIILNNSNVFMRKQGVAISGRFICGNTSALSNSTKVRIVDIDTGPDPDDTLDEKFVDATGAFKLNGYTRELTDIDPVLYVWTRCYSLEAPCHRKIKFLIPKKFIIGEEPKLNEWLDIGIINLQSTFEDEKRECIF
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 17270.1 | 151 | 5.45 | 0.045 | 24.53 |
Plant infestation information
| Experimental plant: Solanum lycopersicum (related: tomato) | |
| Susceptible plant: Arabidopsis thaliana | Disease name: Root-knot |
| Host classification: Eudicots | NCBI Species: 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|---|---|---|---|
|
Q9SJ89
|
Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic
|
FTRC
|
Arabidopsis thaliana (related: thale cress)
|
MNLQAVSCSFGFLSSPLGVTPRTSFRRFVIRAKTEPSEKSVEIMRKFSEQYARRSGTYFCVDKGVTSVVIKGLAEHKDSYGAPLCPCRHYDDKAAEVGQGFWNCPCVPMRERKECHCMLFLTPDNDFAGKDQTITSDEIKETTANM
|
External Links
Interpro: IPR001534,IPR038479
Pfam: PF01060
SMART:
KEGG:
PRINTS: