Effector profile
PlantPEAD ID: PlantPEAD01225 | Uniprot ID: A0A7U7PR84 | Source: Article |
Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 305 | Pathogen type: Bacteria |
Species: Ralstonia solanacearum | Strain: OE1-1 | Other name: Ralstonia nicotianae, Pseudomonas solanacearum |
Gene name: RipAY | NCBI Gene ID: CP012688 | |
Entry name: A0A7U7PR84_RALSL | Protein name: Type III effector protein RipAY | |
DOI: 10.1074/jbc.M115.678953 |
Gene/Protein information
Gene sequence:
ATGAAAAGAATCTCAACAGGTGCCCTCTCGGGGGCGACTGCGCCGCCGGGCCCGAGGAGCGGAGACGACGCGTCATCTTCCAAGAAAACAAGCCTGCCGACCAAACGAGCCGATGCGCCACTGGCCCGGCTGACCGGCCGGAATCCGGCGAACGCGCCAAGGCCCGCCGGCCCCCTAGGCAGCCGACTCGCGCCCTTGCCGCCGCGCACGATACTGCCCGACCCTCCTCCGACTCCTGCCGCCGCCGGCTGGAATCCGATCTCCCGCCTGAAGGCAGAAGAACTGGCGGATATCCCCGAGACGGTCATCGAGACGTTGACCAACGATATTCGCGAGCTCCGCAACGAAGTGAAGGACAAGGGGCTCGACTATGTTCCGGTATTCGGCTACCTGTCCTTGCGCTACAAGAATTCCCATGAGCTCGGCAAGAACAATCAGGATGAGGTCTGCGAAGGGAAGGACTGGCTTCCCGCCACGCTGCGGGGACACGACCTGGACTACGTCATGAGTACGCAATACCGGGGCCACCACCAGCACCCCGGCGTCGTGGCAGGCCTGAGCCGTAGCGAGGGCAAGTCCATGGAGGGCATCATCCTGAAGCTGCCGGTTGCCAACGCGGAAGAGCTGCTCGCCCGCGTCATCCGCCGAGAGTTGCTGGATGAGAACGACCTGATCCATCCCAGAGCACGCCGCGTCCAGCCCCATGCCATCGGGCAATCCACTCCAACGGCTACCGGCCAAGCGGCCCCGACCTCCCCCGGCAAACCACGCTCCAACCTGATGTACACCAGCGCGGTCAGACCGGTCACGCTTCCCGATGGTGTCACGACGGTCAAAGCGCTGGTGTTCGTGACCAACCCCGACAGCGCCAAGTCGTTGGCGACCGTGTTCAAGGACAGCGGTGGCGTGAGCGCCGAGCAGTTGGCCTACTTCATGACGAGCAAAGGCAACCTCGGCGGTTCGTCGATCGACTACTGGAAGCGCTTCGTCGCGATCTGCGAGCAGGCCGGCACGCCGGTGCCGCCAATGGTGCTGCAGGCGATCGCATTGGCCGAGCAATGCGACCCCGCAAACGCAGACGACGTGCTCCTCAAGCTGAAAGGCGCAGCCACCCCACGCCGCGTCTGGCATGAGCGCAAACCGGAACTACAAGCCGGCCGCGACGGCGGGCAAACCGGCGTGCCGCCAGGCGCTCAACCCAAGCCCAGCTGA
Protein sequence:
MKRISTGALSGATAPPGPRSGDDASSSKKTSLPTKRADAPLARLTGRNPANAPRPAGPLGSRLAPLPPRTILPDPPPTPAAAGWNPISRLKAEELADIPETVIETLTNDIRELRNEVKDKGLDYVPVFGYLSLRYKNSHELGKNNQDEVCEGKDWLPATLRGHDLDYVMSTQYRGHHQHPGVVAGLSRSEGKSMEGIILKLPVANAEELLARVIRRELLDENDLIHPRARRVQPHAIGQSTPTATGQAAPTSPGKPRSNLMYTSAVRPVTLPDGVTTVKALVFVTNPDSAKSLATVFKDSGGVSAEQLAYFMTSKGNLGGSSIDYWKRFVAICEQAGTPVPPMVLQAIALAEQCDPANADDVLLKLKGAATPRRVWHERKPELQAGRDGGQTGVPPGAQPKPS
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
43099 | 403 | 9.3 | -0.464 | 44.48 |
Plant infestation information
Experimental plant: Arabidopsis thaliana (related: thale cress) | |
Susceptible plant: Solanum melongena, Solanum lycopersicum, Solanum tuberosum | Disease name: Bacterial wilt |
Host classification: Eudicots | NCBI Species: 4111, 4081, 4113 |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|---|---|---|---|
Q39241
|
Thioredoxin H5
|
TRX5
|
Arabidopsis thaliana (related: thale cress)
|
MAGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKHGGLVASA
|
Q42403
|
Thioredoxin H3
|
TRX3
|
Arabidopsis thaliana (related: thale cress)
|
MAAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVVFFKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKTVVAAA
|
Q38879
|
Thioredoxin H2
|
TRX2
|
Arabidopsis thaliana (related: thale cress)
|
MGGALSTVFGSGEDATAAGTESEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEKKVSKLRA
|
External Links
Interpro: IPR006840
Pfam: PF04752
SMART:
KEGG:
PRINTS: