Effector profile
PlantPEAD ID: PlantPEAD01226 Uniprot ID: A0A0H2X6Y3 Source: Article
Localization: Cytoplasmic(Exp) Pathogen taxonomy ID: 339 Pathogen type: Bacteria
Species: Xanthomonas campestris Strain: pv. campestris strain 8004 Other name:
Gene name: XopD NCBI Gene ID: CP000050
Entry name: A0A0H2X6Y3_XANC8 Protein name: Virulence protein
DOI: 10.1111/nph.12918
Gene/Protein information
Gene sequence:
GTGGAATCCCAAGACCCGGCGGGTTCTTCCTATTCTTCCTATTCGTCCCTGATCCCGCCCACCCCCTCTGGCGGTTGGCCGCAGAACGCATCAGGTGAGTGGTATCCCGATACTCCGGCTGATTCTTCCTATCGTGCATGGCCAGCCCGGCCCGAAGCGTCGAGTTCCACCTTCGATGATCTCGAGTCCTTGGACTCCAGGCGGAACTATAGTTATCGCGAATTCGACCTCAACACCCCCCAGGAAATCGAGCAGCCAGGGTGGTGGCAGCACGCCACGTCGGCGGGTTCTTCCTATCGTGCATGGCCAGCCCAGCCCGAAGCATCGAGTTCCACCTTCGATGATCTCGAGTCCTTGGACTCCAGGCAGAACTATGGTTATCGCGAATTCGACCTCAACACCCCCCAGGAAATCGAGCAGCCAGGGTGGCAGTACGCCACGCCCGCCCAAAGCACGGACTCGACCTTCGACGGCCTCTCCTCCATGAGCCATTATGGCCGCGAATTCGACCTCAACACCCCCCAGGAAGAAGATGAGCCTTGGGACTACGGCACGCAGACTCCCGTGGGGCACTCGGCCATGAGTCCCGAGAGGATCGATGTGGACAATCTGCCGTCGCCCCAGGACGTCGCAGACCCCGAGCTTCCTCAAGTGACGGACACTTCGTGGCTGCTGGATGGACATTTGCGCGCCTACACCGACGACCTCGCTCGCCGATTGCGAGGGCAGCCCAATGCCCATTTACTTCACTTTGCCGACTCGCAGGTAGTGACCATGCTGAGCTCCACAGATCCAGGCCAACAGGCCCGCGCACGGCGCCTTCTTGTCGGAGACGACGTCCCACCTATCGTGTTCCTGCCGATCAATCAGCCCAACTTTCATTGGTCATTGCTCGTCGTCGACCGTCGCAACAAGGACGCTGCCGCAGCCTACTACTACGATTCCATGGCACAGACGCAGCCACAGCAACGCTACCTTGCCGACATGGCGGCCTATCACCTCGGCCTTGATTATAAAGAAATTCATGAAATGCCCACCGCGATACAGCCGGACGGTTATTCCTGCGGCGATCATGTGCTGACCGGGATAGAGACGCTGGCTCACAGGGTGATCGACGGCACGTTCGACTCTGCGGACGGCAGGGACCTGAGCGAGATCGCACCAGGCCGCGGCCTCATCACGGATCGTCTTGCCCAAGCCCAAGCCCAAGCGGAGAGGGATCGTCTTGCCCAAGCGGAGCAAGCTCCAGCAGAAAGCAGCGTCAGGCAAGTTTCCGAACGATCTATCGAACAGAAGAAAAAGAAAAGCAAGTGGTGGAAAAAGTTCTAG
Protein sequence:
MESQDPAGSSYSSYSSLIPPTPSGGWPQNASGEWYPDTPADSSYRAWPARPEASSSTFDDLESLDSRRNYSYREFDLNTPQEIEQPGWWQHATSAGSSYRAWPAQPEASSSTFDDLESLDSRQNYGYREFDLNTPQEIEQPGWQYATPAQSTDSTFDGLSSMSHYGREFDLNTPQEEDEPWDYGTQTPVGHSAMSPERIDVDNLPSPQDVADPELPQVTDTSWLLDGHLRAYTDDLARRLRGQPNAHLLHFADSQVVTMLSSTDPGQQARARRLLVGDDVPPIVFLPINQPNFHWSLLVVDRRNKDAAAAYYYDSMAQTQPQQRYLADMAAYHLGLDYKEIHEMPTAIQPDGYSCGDHVLTGIETLAHRVIDGTFDSADGRDLSEIAPGRGLITDRLAQAQAQAERDRLAQAEQAPAESSVRQVSERSIEQKKKKSKWWKKF
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
49646.1 442 4.6 -0.847 62.88
Plant infestation information
Experimental plant: Arabidopsis thaliana (related: thale cress)
Susceptible plant: Brassica napus, Arabidopsis thaliana Disease name: Black rot
Host classification: Eudicots NCBI Species: 3708, 3702
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
Q9LQT8
DELLA protein GAI
GAI
Arabidopsis thaliana (related: thale cress)
MKRDHHHHHHQDKKTMMMNEEDDGNGMDELLAVLGYKVRSSEMADVAQKLEQLEVMMSNVQEDDLSQLATETVHYNPAELYTWLDSMLTDLNPPSSNAEYDLKAIPGDAILNQFAIDSASSSNQGGGGDTYTTNKRLKCSNGVVETTTATAESTRHVVLVDSQENGVRLVHALLACAEAVQKENLTVAEALVKQIGFLAVSQIGAMRKVATYFAEALARRIYRLSPSQSPIDHSLSDTLQMHFYETCPYLKFAHFTANQAILEAFQGKKRVHVIDFSMSQGLQWPALMQALALRPGGPPVFRLTGIGPPAPDNFDYLHEVGCKLAHLAEAIHVEFEYRGFVANTLADLDASMLELRPSEIESVAVNSVFELHKLLGRPGAIDKVLGVVNQIKPEIFTVVEQESNHNSPIFLDRFTESLHYYSTLFDSLEGVPSGQDKVMSEVYLGKQICNVVACDGPDRVERHETLSQWRNRFGSAGFAAAHIGSNAFKQASMLLALFNGGEGYRVEESDGCLMLGWHTRPLIATSAWKLSTN
Q9C8Y3
DELLA protein RGL1
RGL1
Arabidopsis thaliana (related: thale cress)
MKREHNHRESSAGEGGSSSMTTVIKEEAAGVDELLVVLGYKVRSSDMADVAHKLEQLEMVLGDGISNLSDETVHYNPSDLSGWVESMLSDLDPTRIQEKPDSEYDLRAIPGSAVYPRDEHVTRRSKRTRIESELSSTRSVVVLDSQETGVRLVHALLACAEAVQQNNLKLADALVKHVGLLASSQAGAMRKVATYFAEGLARRIYRIYPRDDVALSSFSDTLQIHFYESCPYLKFAHFTANQAILEVFATAEKVHVIDLGLNHGLQWPALIQALALRPNGPPDFRLTGIGYSLTDIQEVGWKLGQLASTIGVNFEFKSIALNNLSDLKPEMLDIRPGLESVAVNSVFELHRLLAHPGSIDKFLSTIKSIRPDIMTVVEQEANHNGTVFLDRFTESLHYYSSLFDSLEGPPSQDRVMSELFLGRQILNLVACEGEDRVERHETLNQWRNRFGLGGFKPVSIGSNAYKQASMLLALYAGADGYNVEENEGCLLLGWQTRPLIATSAWRINRVE
Q9SLH3
DELLA protein RGA
RGA
Arabidopsis thaliana (related: thale cress)
MKRDHHQFQGRLSNHGTSSSSSSISKDKMMMVKKEEDGGGNMDDELLAVLGYKVRSSEMAEVALKLEQLETMMSNVQEDGLSHLATDTVHYNPSELYSWLDNMLSELNPPPLPASSNGLDPVLPSPEICGFPASDYDLKVIPGNAIYQFPAIDSSSSSNNQNKRLKSCSSPDSMVTSTSTGTQIGGVIGTTVTTTTTTTTAAGESTRSVILVDSQENGVRLVHALMACAEAIQQNNLTLAEALVKQIGCLAVSQAGAMRKVATYFAEALARRIYRLSPPQNQIDHCLSDTLQMHFYETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPALMQALALREGGPPTFRLTGIGPPAPDNSDHLHEVGCKLAQLAEAIHVEFEYRGFVANSLADLDASMLELRPSDTEAVAVNSVFELHKLLGRPGGIEKVLGVVKQIKPVIFTVVEQESNHNGPVFLDRFTESLHYYSTLFDSLEGVPNSQDKVMSEVYLGKQICNLVACEGPDRVERHETLSQWGNRFGSSGLAPAHLGSNAFKQASMLLSVFNSGQGYRVEESNGCLMLGWHTRPLITTSAWKLSTAAY
Q8GXW1
DELLA protein RGL2
RGL2
Arabidopsis thaliana (related: thale cress)
MKRGYGETWDPPPKPLPASRSGEGPSMADKKKADDDNNNSNMDDELLAVLGYKVRSSEMAEVAQKLEQLEMVLSNDDVGSTVLNDSVHYNPSDLSNWVESMLSELNNPASSDLDTTRSCVDRSEYDLRAIPGLSAFPKEEEVFDEEASSKRIRLGSWCESSDESTRSVVLVDSQETGVRLVHALVACAEAIHQENLNLADALVKRVGTLAGSQAGAMGKVATYFAQALARRIYRDYTAETDVCAAVNPSFEEVLEMHFYESCPYLKFAHFTANQAILEAVTTARRVHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGIGPPQTENSDSLQQLGWKLAQFAQNMGVEFEFKGLAAESLSDLEPEMFETRPESETLVVNSVFELHRLLARSGSIEKLLNTVKAIKPSIVTVVEQEANHNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQDRVMSEVYLGRQILNVVAAEGSDRVERHETAAQWRIRMKSAGFDPIHLGSSAFKQASMLLSLYATGDGYRVEENDGCLMIGWQTRPLITTSAWKLA
Q9LF53
DELLA protein RGL3
RGL3
Arabidopsis thaliana (related: thale cress)
MKRSHQETSVEEEAPSMVEKLENGCGGGGDDNMDEFLAVLGYKVRSSDMADVAQKLEQLEMVLSNDIASSSNAFNDTVHYNPSDLSGWAQSMLSDLNYYPDLDPNRICDLRPITDDDECCSSNSNSNKRIRLGPWCDSVTSESTRSVVLIEETGVRLVQALVACAEAVQLENLSLADALVKRVGLLAASQAGAMGKVATYFAEALARRIYRIHPSAAAIDPSFEEILQMNFYDSCPYLKFAHFTANQAILEAVTTSRVVHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGVGNPSNREGIQELGWKLAQLAQAIGVEFKFNGLTTERLSDLEPDMFETRTESETLVVNSVFELHPVLSQPGSIEKLLATVKAVKPGLVTVVEQEANHNGDVFLDRFNEALHYYSSLFDSLEDGVVIPSQDRVMSEVYLGRQILNLVATEGSDRIERHETLAQWRKRMGSAGFDPVNLGSDAFKQASLLLALSGGGDGYRVEENDGSLMLAWQTKPLIAASAWKLAAELRR