Effector profile
PlantPEAD ID: PlantPEAD01228 Uniprot ID: B9K425 Source: Article
Localization: Cytoplasmic(Exp) Pathogen taxonomy ID: 373 Pathogen type: Bacteria
Species: Agrobacterium vitis Strain: strain ATCC BAA-846 / DSM 112012 / S4 Other name: Rhizobium vitis
Gene name: VirE2 NCBI Gene ID: CP000637
Entry name: B9K425_ALLAM Protein name: Exported virulence protein
DOI: 10.1111/mpp.12595
Gene/Protein information
Gene sequence:
ATGGATCCGAAGGCCTATGGCGATGGTAAATATATTAATGTGACAGACGGAAACGACGCCCAAAATGCTGGTGTCGACGATCCAAAACGCCAGAAGACGGAAGGCGCAAATTCGAACACGCTCTTCGATGTTCATATGACGGGTAGCCATGAAACTCTCGAACACAATATGCACGAGAGCCCTACGCATACAGAAGATCTCGAATCGCATTTCGATGAGGGAACGCTTGGTTATCAGTCAGGCCATGATTCAACCAGTGTCCACGGCTACCAGTCTGAGGGTGAAAATGATTTATCCAGCTTGTTCGCGAATATGGCATTACCAGGCCATGACCGACGGCCAGACGAGTATATTCTTGTACGGCAGACTGGGCAGGACAGGTTCGCAGGTACTATTAAAGGTAACCTCAATCATCTGCCCACCAAGGCGGAATTCAATGCGAGTTGCCGGCTATATAGGGACGGGGTCGGTAACTACTATCCCCCACCCCTCGCGTTCGACAAGATCGATCTCCCGGAGCAATTGGGTGCAAGCCTGCATAAACTGGAGCCAAAAGAACGGAGCAAGCCGCGCTTTCAATACAAGTTGGAAGTCTGGAATCGTGCTCACGCCGAGATGGGTATTACTGGCACCGCCATTTTTTATCAAACTAACAAGAATATCAAGCTCGACCGCAATAATAAATTGAGGCCTGAGGATAGATATATACAAACAGAAAAATACGGGCGCAGAGAAATTCAAAAACGCTATGAGCACGAGTTTCAAGCTGGTTCACTGCTGCCGGATATTCTAATCAAGACTCCGCAAAATGACATACATTTTGCTTACAGGTTTGCCGGCGACGCCTACGCTAATAAGCGATTTGAGGAATTCGAACGCGCCATCAAAAATAAGTACGGCAGCAATACCGAGATCAAGCTGAAATCCAGGTCTGGCATTATGCATGACTCAAAATATTTGGAATCATGGGAGCGAGGCAGTGCGGATATCCGTTTCGCTGAGTTCGCAGGCGAGAATCGAGCTCACAACAGACAGTTCCCCGCTGCGACTGTGAATATGGGAAGGCAGCCGGACGGGCAGGAAGGGACGACCAGTGATCGTCACGTGAGCGTTGACTACCTATTTCAAAATGCGCCCAATTCCCCTTGGACGCAAGCCTTGAAAGAGGGAAAGTTGTGGGATCGCGTTCAGGTCCTGGCTCGCGACGGCAACGGTTACATGTCACCTGCAAGACTGGAATATTCTGACCCCGAACACTTCACCCAGCTGATGAACCGAGTCGGTCTGCCTGTTTCGATGGGTCGGCAAAGCCACGCGAATAGTGTCAAGTTTGAGCAGTTTGACCTACAGGCGTCGGTTATTGTTGCGGATGGCCCGAACTTACGTGATGTTCGAGATCTGTCCCAGGAAAAGCGGCAACAACTGACTCAAAAAGATGTCCTGATATCGGATCGCAATGAAAAGGGTCAGAGAACTGGCACTTACACCAGTGTTGCGGAATATGAGCGCCTGATGATGAAATTGCCCGACGACGCAGCGCAGCTTCTCGCTGTACCAACCGATAAATATTCGCGTGAGTTTGTCCGGCCAGAGGCAGCATTGCCGCCGATTAGTGACAGTCGGCGCGGTTACGAAAGCCGACCTCGTGGCACGACCGTAAACAGTCTGTAG
Protein sequence:
MDPKAYGDGKYINVTDGNDAQNAGVDDPKRQKTEGANSNTLFDVHMTGSHETLEHNMHESPTHTEDLESHFDEGTLGYQSGHDSTSVHGYQSEGENDLSSLFANMALPGHDRRPDEYILVRQTGQDRFAGTIKGNLNHLPTKAEFNASCRLYRDGVGNYYPPPLAFDKIDLPEQLGASLHKLEPKERSKPRFQYKLEVWNRAHAEMGITGTAIFYQTNKNIKLDRNNKLRPEDRYIQTEKYGRREIQKRYEHEFQAGSLLPDILIKTPQNDIHFAYRFAGDAYANKRFEEFERAIKNKYGSNTEIKLKSRSGIMHDSKYLESWERGSADIRFAEFAGENRAHNRQFPAATVNMGRQPDGQEGTTSDRHVSVDYLFQNAPNSPWTQALKEGKLWDRVQVLARDGNGYMSPARLEYSDPEHFTQLMNRVGLPVSMGRQSHANSVKFEQFDLQASVIVADGPNLRDVRDLSQEKRQQLTQKDVLISDRNEKGQRTGTYTSVAEYERLMMKLPDDAAQLLAVPTDKYSREFVRPEAALPPISDSRRGYESRPRGTTVNSL
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
63315.1 556 6.28 -0.942 41.1
Plant infestation information
Experimental plant: Arabidopsis thaliana (related: thale cress)
Susceptible plant: Disease name: Crown gall
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
Q8VWG0
AtbZIP transcription factor
BZIP52
Arabidopsis thaliana (related: thale cress)
MEKSDPPPVPKPGATIIPSSDPIPNADPIPSSSFHRRSRSDDMSMFMFMDPLSSAAPPSSDDLPSDDDLFSSFIDVDSLTSNPNPFQNPSLSSNSVSGAANPPPPPSSRPRHRHSNSVDAGCAMYAGDIMDAKKAMPPEKLSELWNIDPKRAKRILANRQSAARSKERKARYIQELERKVQSLQTEATTLSAQLTLYQRDTNGLANENTELKLRLQAMEQQAQLRNALNEALRKEVERMKMETGEISGNSDSFDMGMQQIQYSSSTFMAIPPYHGSMNLHDMQMHSSFNPMEMSNSQSVSDFLQNGRMQGLEISSNSSSLVKSEGPSLSASESSSAY
Q9MA75
Transcription factor VIP1
VIP1
Arabidopsis thaliana (related: thale cress)
MEGGGRGPNQTILSEIEHMPEAPRQRISHHRRARSETFFSGESIDDLLLFDPSDIDFSSLDFLNAPPPPQQSQQQPQASPMSVDSEETSSNGVVPPNSLPPKPEARFGRHVRSFSVDSDFFDDLGVTEEKFIATSSGEKKKGNHHHSRSNSMDGEMSSASFNIESILASVSGKDSGKKNMGMGGDRLAELALLDPKRAKRILANRQSAARSKERKIRYTGELERKVQTLQNEATTLSAQVTMLQRGTSELNTENKHLKMRLQALEQQAELRDALNEALRDELNRLKVVAGEIPQGNGNSYNRAQFSSQQSAMNQFGNKTNQQMSTNGQPSLPSYMDFTKRG
O22873
bZIP transcription factor 18
BZIP18
Arabidopsis thaliana (related: thale cress)
MEDPSNPQPNQSNLSQCPPLATAPTPAPVRGPYHRRAHSEVQFRLPEDLDLSEPFGGFDELGSEDDLFCSYMDIEKLGSGSGSASDSAGPSAPRSDNPFSAENGGAEAGNSRPRHRHSLSVDGSSTLESIEAKKAMAPDKLAELWVVDPKRAKRIIANRQSAARSKERKARYILELERKVQTLQTEATTLSAQLSLFQRDTTGLSSENTELKLRLQVMEQQAKLRDALNEQLKKEVERLKFATGEVSPADAYNLGMAHMQYQQQPQQSFFQHHHQQQTDAQNLQQMTHQFHLFQPNNNQNQSSRTNPPTAHQLMHHATSNAPAQSHSYSEAMHEDHLGRLQGLDISSCGRGSNFGRSDTVSESSSTM