Effector profile
PlantPEAD ID: PlantPEAD01229 Uniprot ID: Q44445 Source: Article
Localization: Cytoplasmic(Exp) Pathogen taxonomy ID: 1176649 Pathogen type: Bacteria
Species: Agrobacterium fabrum Strain: B6 Other name: Agrobacterium tumefaciens
Gene name: VirE3 NCBI Gene ID: AF242881
Entry name: Q44445_RHIRD Protein name: VirE3
DOI: 10.1093/nar/gkl877
Gene/Protein information
Gene sequence:
ATGGTGAGCACTACGAAGAAAAGTTTTGCAAAGTCGCTGACGGCAGATATGCGCCGTTCTGCTCAGCGCGTTGTCGAGCAAATGCGAAAAGCATTGATTACCGAAGAAGAGGCGCTCAAGCGGCAAACCAGACTGGAGAGCCCCGATAGGAAGCGAAAGTATGCTGCTGATATGGCGATAGTCGACAAGCTCGACGTAGGGTTTCGTGGCGAAATAGGCTATAAAATTCTGGGAAATAAACGGCTTCGAGTAGACAACCCAAAAGAATTAACGCGTGAGCACGGTAGACTTCGCAAAACCAAGACGGTTCTGAAGCGTAACCCGGTGACGCAGGAGGTCTATTTGGGTTTACATGAAAGGAAGTCCTGGTTAAGTGTCAGCAGCCATTTGTATGCTGCGGACGGCACACTCCGCATGAAGCACGTGAAGTACAAAGATGGACGTTTTGAGGAAAGATGGGAGCGCGACGAAAATGGCGACCTGATCCGCACACGGTACGCCAACCGTGGCAGGCTCTTTCAACCTGTATCCGAGAAGATGGGCGCGCCGTATCGGAGCGGCCCTGACAACCGGCTCTATCGCGATCTAACCCGTCAAAACGGTTTCAGACGGGAAACCTTTGAACGGGACGATCAAGGAAACCTCGAGCGTATCGGCAGCAACCATGTCGGCTTTTCCAAGATTTCAGTGAAGGCAGCCAATCGTCAAACCTCCCAGACGAAGATTCAAAAACTTGGTGGCGCTTTCAACAAATCTTTTAGGTCCCTCCTGGACAAGGAGGGCAACGAACTCGGCCGCGATATTTTGAGCCATCGACGGCTCTATAACAAGCGGTCTGCTGTCTACGATGAAGCTACCGGACAATTGAAGAGTGCCAAGCATACCTTCGGCAAGATCTACAGGAGCGAAACCGACTATCTCAGCGCGGGCCTCAAGAAGGTTTCAAAAAAGATACTTGGGGTGACGGTCTACCGGAAATTTGCGGCGCTCAGCGAGCGAGAATCCGAGGCTGAAAGACTGCGTAGTTTTGAATCCGGTGCGCATCGCCAGATCTGGCAGGAGCGGGCAGCGACTCCCGGTTCGCCCCCCTCGGAGAGTGATGACATTCATTTCGCACAACAGTCGCACCTAGCCAAAGCCAACTCTGACCACGTCGAAGCTGACGTCATGCGTGTGACAGATCAACATATTGATGTTGCTGGACAAACATCATCGTCTCGCCAACGGAACTTGGAAGAACGGTTAGATTCTCAATCACGATACAAGCCAGCAAACATGTTGTTGTCAGATCCAGACCTTCGAGCGGACGGACCTCGCCCATACGAAGGGTTAGCTGAACTCACCCTCCGGCGCGATAATGAATCTGACGGGCACAAGGAGAATGATCAGCGGCTGCGACATTTCTTGCAGCCAGAGCCGTTGGTATTACCGCATCCCGGGTCGCCGGAAATAACAAAGGTGTTTGGCTCGCGGGGAGAGCCGTTACACCCGAGTGGAACTCTGCACACGGCGGTTGGAGAAACGGCTTGCGAAGCACCGGTGATGTCTTCATCCCTTGACAATCATCAGCCAGCTCCAGGACAGCAAGAACTCTTGAGTCTCCTTCATAATGCGCCAGCGCCAGTTTCTGTGGCAATACATGATGAACAAGAACGACTTGCGGGGGAGGCGCCCGGCGGTTCTTTCAGAGGTAGCTCAGGGCGAACGAGTTCAATGTCGGAGAGTATCTTCGACGAAGATGTACAATCGCATTTGGTACGGGATTATTCGATCAATCCCACTAACGGGTTTATTGACCCGCAATCGTTGTTCGGTGGACCGGACTTATCGAGAGGTCCAAAATCGGGGCCAGAAATTCCATCGGAAGATTACCATTTGTCAGCTTCGGAACAGGAAAATTTGCTGAATCAATTGCTTAGTGTGCCACTGCCGATTCCTTCACCGAAGCCCAAATCCGCGAGGTCTATGATTTTCGAAGGTTCACGTCCAAGAGAGCGTTCCACCTCCAGAGGTTTCTAA
Protein sequence:
MVSTTKKSFAKSLTADMRRSAQRVVEQMRKALITEEEALKRQTRLESPDRKRKYAADMAIVDKLDVGFRGEIGYKILGNKRLRVDNPKELTREHGRLRKTKTVLKRNPVTQEVYLGLHERKSWLSVSSHLYAADGTLRMKHVKYKDGRFEERWERDENGDLIRTRYANRGRLFQPVSEKMGAPYRSGPDNRLYRDLTRQNGFRRETFERDDQGNLERIGSNHVGFSKISVKAANRQTSQTKIQKLGGAFNKSFRSLLDKEGNELGRDILSHRRLYNKRSAVYDEATGQLKSAKHTFGKIYRSETDYLSAGLKKVSKKILGVTVYRKFAALSERESEAERLRSFESGAHRQIWQERAATPGSPPSESDDIHFAQQSHLAKANSDHVEADVMRVTDQHIDVAGQTSSSRQRNLEERLDSQSRYKPANMLLSDPDLRADGPRPYEGLAELTLRRDNESDGHKENDQRLRHFLQPEPLVLPHPGSPEITKVFGSRGEPLHPSGTLHTAVGETACEAPVMSSSLDNHQPAPGQQELLSLLHNAPAPVSVAIHDEQERLAGEAPGGSFRGSSGRTSSMSESIFDEDVQSHLVRDYSINPTNGFIDPQSLFGGPDLSRGPKSGPEIPSEDYHLSASEQENLLNQLLSVPLPIPSPKPKSARSMIFEGSRPRERSTSRGF
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
75686.7 672 9.5 -0.884 53.16
Plant infestation information
Experimental plant: Nicotiana benthamiana (no common name found), Solanum lycopersicum (related: tomato)
Susceptible plant: Disease name: Crown gall
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
Q8LAZ7
COP9 signalosome complex subunit 5a
CSN5A
Arabidopsis thaliana (related: thale cress)
MEGSSSAIARKTWELENNILPVEPTDSASDSIFHYDDASQAKIQQEKPWASDPNYFKRVHISALALLKMVVHARSGGTIEIMGLMQGKTEGDTIIVMDAFALPVEGTETRVNAQSDAYEYMVEYSQTSKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQYQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGHKISDDHVSEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAESQLANSRYGGIAPAGHQRRKEDEPQLAKITRDSAKITVEQVHGLMSQVIKDILFNSARQSKKSADDSSDPEPMITS
O80480
Importin subunit alpha-4
IMPA4
Arabidopsis thaliana (related: thale cress)
MSLRPSTRAELRKKIYKTGVDADEARRRREDNLVEIRKNKREDSLLKKRREGMMLQQQLPLGAGLDGPQTAAAVEKRLEGIPMMVQGVYSDDPQAQLEATTQFRKLLSIERSPPIDEVIKAGVIPRFVEFLGRHDHPQLQFEAAWALTNVASGTSDHTRVVIEQGAVPIFVKLLTSASDDVREQAVWALGNVAGDSPNCRNLVLNYGALEPLLAQLNENSKLSMLRNATWTLSNFCRGKPPTPFEQVKPALPILRQLIYLNDEEVLTDACWALSYLSDGPNDKIQAVIEAGVCPRLVELLGHQSPTVLIPALRTVGNIVTGDDSQTQFIIESGVLPHLYNLLTQNHKKSIKKEACWTISNITAGNKLQIEAVVGAGIILPLVHLLQNAEFDIKKEAAWAISNATSGGSHEQIQYLVTQGCIKPLCDLLICPDPRIVTVCLEGLENILKVGEADKEMGLNSGVNLYAQIIEESDGLDKVENLQSHDNNEIYEKAVKILERYWAEEEEEQILQDGGNDNSQQAFNFGNNPAAPVGGFKFA
Q96321
Importin subunit alpha-1
IMPA1
Arabidopsis thaliana (related: thale cress)
MSLRPNAKTEVRRNRYKVAVDAEEGRRRREDNMVEIRKSKREESLMKKRREGMQALQGFPSASAASVDKKLDSLKDMVAGVWSDDPALQLESTTQFRKLLSIERSPPIEEVISAGVVPRFVEFLKKEDYPAIQFEAAWALTNIASGTSDHTKVVIDHNAVPIFVQLLASPSDDVREQAVWALGNVAGDSPRCRDLVLGCGALLPLLNQLNEHAKLSMLRNATWTLSNFCRGKPQPHFDQVKPALPALERLIHSDDEEVLTDACWALSYLSDGTNDKIQTVIQAGVVPKLVELLLHHSPSVLIPALRTVGNIVTGDDIQTQCVINSGALPCLANLLTQNHKKSIKKEACWTISNITAGNKDQIQTVVEANLISPLVSLLQNAEFDIKKEAAWAISNATSGGSHDQIKYLVEQGCIKPLCDLLVCPDPRIITVCLEGLENILKVGEAEKNLGHTGDMNYYAQLIDDAEGLEKIENLQSHDNNEIYEKAVKILETYWLEEEDDETQQPPGVDGSQAGFQFGGNQAPVPSGGFNFS
O23215
Plant-specific TFIIB-related protein 1
PBRP1
Arabidopsis thaliana (related: thale cress)
MKCPYCSSAQGRCTTTSSGRSITECSSCGRVMEERQTQNHHLFHLRAQDTPLCLVTSDLQTAAQPSPEDEEDPFEPTGFITAFSTWSLEPSPIFARSSLSFSGHLAELERTLELASSTSNSNSSTVVVDNLRAYMQIIDVASILGLDCDISEHAFQLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKITGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPEKAFPTTTISTTRSTTPRAVDPPEPSFVEKDKPSAKPIETFDHTYQQPKGKEDKQPKFRQPWLFGTASVMNPAEMISEPAKPNAMDYEKQQLDKQQQQQLGDKETLPIYLRDHNPFPSNPSPSTGISTINWSFRPSVVPGSSSNLPVIHPPKLPPGYAEIRGSGSRNADNPHGDF