Effector profile
| PlantPEAD ID: PlantPEAD01231 | Uniprot ID: O08242 | Source: Database |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. glycinea race 4 | Other name: Pseudomonas savastanoi pv. glycinea |
| Gene name: AvrD1 | NCBI Gene ID: U87226 | |
| Entry name: O08242_PSESG | Protein name: AvrD protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCAAGACCTTAGCTTTAGCACTATAGAAAATCATTTGGGACCCGCTAAAGATCGTTTCTTTGGTGATGGTTTCAAACATGTGGAGTATAGTGCTAGACACGTTAATCTTACTGAAAGTGCAGCGAACGCAAGTATAAGTCTTAGCTACCCAGCCAACTGGTCAAAAAAGAACGATAGTGGCGAACTAATACCGCACTTGAGCTCCATTGACGCATTGACAATTTCAATTAATCTAAGCCAGGATATTCTACTGAATAGATTCAAAAGTATTGATCACTGTTGGGTGAGAAGAATATCTATCAGGGCCGGAAAAAAACCTGAAGAAGATCTACGTAATATCAATGCGAAAATAACTAAAGAAAGCCAAGGCTTGGACTCCCAAGGGGATACGAATTTAATTTTTGGTGGTAATGTTGGCACGATGACAGTGCAGTTGGAGTTTATCATTCCCGCCGCTCACGAAGTCGACACCATTAAGGATAGTACCGAGAAAAATTGTTACTCTCTACATTTTAAAAATCGCACTCAATTCATCGACGATATTATTTTTTACTCGCCACTCAACGCCATATCAAAACTTTTTGTCGCTAATGATAACGAGCCCCATTTTTTACCTGGCGGAATCGAGGCTAATTACCCTAACATTATAAATCCCGTAGATTCACTTGTCAGTTACGCACAAATAGCGCAAGCACTTCTTTACAAACTCGATGGTTTGACTCGTGGTGAATCAAACACCTTATGGATGAGGAACTTGAATATTATCGCCGAGAATCCCGCAAAGCGCAGAGCGGCGACTCGATTACTAGTAACCGAACTAAAACGTGCTAATATTGTTTCATTAAATGGTGAAAACTGGCGAGTAGCGGAAGTGGCTGGACATATGAATGGTATCACCTTTTCTAGTTCAGTTGCGCATTTATTACCCCTTTAG
Protein sequence:
MQDLSFSTIENHLGPAKDRFFGDGFKHVEYSARHVNLTESAANASISLSYPANWSKKNDSGELIPHLSSIDALTISINLSQDILLNRFKSIDHCWVRRISIRAGKKPEEDLRNINAKITKESQGLDSQGDTNLIFGGNVGTMTVQLEFIIPAAHEVDTIKDSTEKNCYSLHFKNRTQFIDDIIFYSPLNAISKLFVANDNEPHFLPGGIEANYPNIINPVDSLVSYAQIAQALLYKLDGLTRGESNTLWMRNLNIIAENPAKRRAATRLLVTELKRANIVSLNGENWRVAEVAGHMNGITFSSSVAHLLPL
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 34616.2 | 311 | 6.37 | -0.24 | 38.88 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: Glycine max | Disease name: Bacterial blight of soybean |
| Host classification: Eudicots | NCBI Species: 3847 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR008799
Pfam: PF05655
SMART:
KEGG:
PRINTS: