Effector profile
| PlantPEAD ID: PlantPEAD01255 | Uniprot ID: D4I0Q8 | Source: Database |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 552 | Pathogen type: Bacteria |
| Species: Erwinia amylovora | Strain: NCPPB 1665 | Other name: Fire blight bacteria |
| Gene name: Hcp-1 | NCBI Gene ID: FN434113 | |
| Entry name: D4I0Q8_ERWAC | Protein name: Putative type VI secretion system, effector protein hcp | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGGCTATTGATATGTATTTGAAAGTTGACGGTGTAACCGGTGAATCTAAAGATTCTAACCACACCGGTTGGATCGACGTGTCTTCTTTCTCCTGGGGCGCTACCCAGCCGGGCAATATGTCGGTAGGCGGCGGCGGCGGTGCCGGTAAAGTGAACTTTAACGATCTGCACATCAATGCAAAAATTGATAAAGCGGTCACCGCGCTGCTGAAAAACTGCGCCAGCGGTAAGCACGTAGGTAAAGTAGAAGTTTCCGTATGTAAAGCGGGCGGCACTCAGATTGAGTACACGCGTATTACTCTGGAAGACGTGCTGGTCACCAACGTGCAGTTCGTTGGTTCCGACGGTGACGATACTCTGGGCGTAACCTACGCATTCCAGGCTGCCAAAGTGAAACAGCAGTACTGGGAGCAGAGCACCTCCGGCGGTAAAGGCGCAGAAAGCAGCGCTGGCTGGAATATTAAAGAGAATAAAGAAGCGTAA
Protein sequence:
MAIDMYLKVDGVTGESKDSNHTGWIDVSSFSWGATQPGNMSVGGGGGAGKVNFNDLHINAKIDKAVTALLKNCASGKHVGKVEVSVCKAGGTQIEYTRITLEDVLVTNVQFVGSDGDDTLGVTYAFQAAKVKQQYWEQSTSGGKGAESSAGWNIKENKEA
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 16835.7 | 160 | 5.57 | -0.329 | 24.51 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: Pyrus | Disease name: Fire blight |
| Host classification: Eudicots | NCBI Species: 3766 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR036624,IPR008514
Pfam: PF05638
SMART:
KEGG: eam:EAMY_3019
PRINTS: