Effector profile
| PlantPEAD ID: PlantPEAD01263 | Uniprot ID: A0A0F7A7U6 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. syringae strain B728a | Other name: |
| Gene name: HopAG1 | NCBI Gene ID: CP006256 | |
| Entry name: A0A0F7A7U6_PSESY | Protein name: Type III effector HopAG1 | |
| DOI: 10.3389/fpls.2018.00977 | ||
Gene/Protein information
Gene sequence:
ATGATAAATCCCGTAAAACACAATTTTAGTCACCTTGGGTTTTCAAACGCTCAAAGTACCTCGGCACTGGGGCCTGCCAGTAATAAAGTGCCCAACTTTGTTTCGCGAGGGCGAGGCAAGGGAGTTCCAGTGGAGGAATTCAATACTGCCGAAGAGTGTCGTTTGGCGGGTCGGCAGGACAGCGTACTGGATTCGATAGACGGCAAAGAGTTCATGCGACTGCTGCAGAAGTACACGGCCTCTGAAACAACCGAAGATGAATTTGCGGACCTGAGAGCCTCCATACCGCGCTACTCCATTGAGTTGGCCAAGTCGGATCATCCTAAAGTGCTTTATCGGGGGATATCTCTGGATGATGAGGCGGCGTCGCTTTTACTGAATACCTCCAAGGGTTACCGCAGTCGCGAAATAGCCCATGGTCTTATTCACGGCCTGCGCGTGGTTAAAGGCGTTTACACCGCGACTGGGGTGGCCAGCGCCTCGACAGTGTCAGCCGTTTCGCAAGGCTTTGCGCTGGTGAACGCGAACAGGAAAAAAGAAACACCGGTTCTTTTTGTACTGAAAGCGATGCCTGCCGTTCCCGCGCTCAACCACAGTGGTGCAAAGGGTGTGACACTCAGTGAGAGCCGGTTGCCGTTATCGGTGGCCAGCAAGAGTGAACATGAAGTCATTCTGGATATCACCAACCGGTACGAAATTACGCAGGCTCGCCGGAGCGGTGAGTTCATTGTCGTCGACATGACTGTTTTAGGGCGGTCCAAGAGGGGAGGTGAATTCGCCCTCGTCGAGACTGACAAATGGAAACAACTCTCTGGCGCCAAGGGCTCTAATCCAGGTGGATTGTTTCAAGCGCCCAATGGCGTTAAGTGGTATGTAAAAACCAACCCGTCTGCCAATAGGCTTCGAAACGAGGTGCTTGCCTCCAGGCTGTACCGTGCCGCAGGAATCGATGTTCCTGACATAGAACTGGCGTCCCGCAAAGGCAAGCCCGCACTGATTTCAAAACTGATAGTAGGGAACCCCAAAGACCTCGATACGCTGGCAAAAAATAGCCAGTTGAAGTGCGGCTTCGCGGTGGATGCCTGGCTGGCGAACTGGGATGTCATCGGTCTGACGGGGGACAATGTCATCTTCAATCATCGTAACAAACCTGTGCGCATCGACCTTGGCGGTGCGCTGGTCTTCCGCGCCCAAGGGGAGCACAAGGGTAATCAGTTCGGTACCACGCCCATGGAGCTGGTCACGATGTTGTCTCGTGAAGACAATTCGTCCAGTCTTGCCTTCCGGAAAATCGAGCGTAATGACATCCGCGAGGGTATTGCAGCGATAGAAAAAATACCGGACGCGCGTATTGCAGCACTGTGCGCAGAACACGGCCCTGGCAATCACAGCGAACGCATTGAGCTCGGTAAAAGACTGATCAGTCGGAAGAAGTGGCTGGTCGATCTGAAGCAGACGCTTCCTTATATTCATCGCCAAAAGAACGAGCGCGGCAATGTTGTCACTGTTAAAAACCCCACGTCTCCCAGCGCTTTGGATACGTGGCGTGATCGATACGCAACAGCCGTTTTTGTACCCCACAGCGCTGTCCGTGGCAGCATGAACAACCTGCCTTTCAGATCATTTACACCCCCAAACACGATGGATGGCTGGCGCCGATTTACAACCCGGGCGGTCAACTTCACAGAGCCGGAATTTAAGCGTTCTCCGCACCTTGCTCCCGCCAGTGGAGCGATCATTTTTGAGCCCGACGGCAGGGTATGGATCACCGAGCCGACCAATCACCCGTTCGGCGCAACGCACGCTTTTCCCAAGGGAAAGCAGGAAGCCGGTCTGAACTTGAGGACCAATGCGCTCAAGGAAGTCTACGAAGAGACGGGGCTTCTGGTGGAATTCCACGGCTTTATCGGTGACTACGACCGAACAACATCCCGTACTCGTTATTACCTTGCCAAACGCATAGATGGCACACCGTCCGATATGGGTTTTGAATCTCAAAGCGTCAAGCTGGCAAACATTACCGAGGCCAAAAGACTGCTACCCAACGCCCTGGATATTGCCATCTTGCGAGACGCCGAACGGGCTTATCTAAAGGGTCCTTTCAAATGA
Protein sequence:
MINPVKHNFSHLGFSNAQSTSALGPASNKVPNFVSRGRGKGVPVEEFNTAEECRLAGRQDSVLDSIDGKEFMRLLQKYTASETTEDEFADLRASIPRYSIELAKSDHPKVLYRGISLDDEAASLLLNTSKGYRSREIAHGLIHGLRVVKGVYTATGVASASTVSAVSQGFALVNANRKKETPVLFVLKAMPAVPALNHSGAKGVTLSESRLPLSVASKSEHEVILDITNRYEITQARRSGEFIVVDMTVLGRSKRGGEFALVETDKWKQLSGAKGSNPGGLFQAPNGVKWYVKTNPSANRLRNEVLASRLYRAAGIDVPDIELASRKGKPALISKLIVGNPKDLDTLAKNSQLKCGFAVDAWLANWDVIGLTGDNVIFNHRNKPVRIDLGGALVFRAQGEHKGNQFGTTPMELVTMLSREDNSSSLAFRKIERNDIREGIAAIEKIPDARIAALCAEHGPGNHSERIELGKRLISRKKWLVDLKQTLPYIHRQKNERGNVVTVKNPTSPSALDTWRDRYATAVFVPHSAVRGSMNNLPFRSFTPPNTMDGWRRFTTRAVNFTEPEFKRSPHLAPASGAIIFEPDGRVWITEPTNHPFGATHAFPKGKQEAGLNLRTNALKEVYEETGLLVEFHGFIGDYDRTTSRTRYYLAKRIDGTPSDMGFESQSVKLANITEAKRLLPNALDIAILRDAERAYLKGPFK
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 77400.1 | 702 | 9.64 | -0.389 | 35.25 |
Plant infestation information
| Experimental plant: Phaseolus vulgaris (related: kidney bean) | |
| Susceptible plant: Solanum lycopersicum, Arabidopsis thaliana | Disease name: Bacterial speck |
| Host classification: Eudicots | NCBI Species: 4081, 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR015797,IPR000086
Pfam: PF00293
SMART:
KEGG:
PRINTS: