Effector profile
| PlantPEAD ID: PlantPEAD01266 | Uniprot ID: Q3J1Y8 | Source: Database |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 305 | Pathogen type: Bacteria |
| Species: Rhodobacter sphaeroides | Strain: OE1-1 | Other name: Cereibacter sphaeroides |
| Gene name: RSp0028 | NCBI Gene ID: CP000143 | |
| Entry name: Q3J1Y8_CERS4 | Protein name: Short chain dehydrogenase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCAGGACAGGCCGGTCGTGGTCATCACCGGAGGAACGGCGGGCGTGGGGCGTGCCCTCGCCAGAGCCTACGCGCACCGCGGCTGGCGCGTGGCGGTTCTGGCGCGCGGACAGGCGGGCCTCGCGGCCACCGCCGCCGACGTGGCCCGTGCCGGGGGCGAGCCCCTGACCCTTGCGGCAGATGTCGCGGACTCCGCCGCCGTCTTCGACGCGGCCGACCGCGTGGTGGCCCGCTGGGGCCGCATCGACCTCTGGATCAACAATGCGATGGTCACGGTCTTCGGCCCGGCCGAGCGCGCGACGCCCGAGGAATATGCCCGCGTCACCGCCGTGACCTACCTCGGCACCGTCCATGGCACGCTCGCGGCGCTGCGCCACATGCGCCCACGCGACCGCGGCACCATCCTTCAGATCGGCTCGGCGCTGGCCTACCGCTCGATCCCCCTGCAGGCCGCCTATTGCGCGGCGAAGGCCGCCTGCCGGGGCTTCACCGACTCGCTCCGGTCCGAGCTTCTGCATGAGAAGAGCCGCATCCGCCTCACCATGGCGCAGCTCCCGGCCGTCGATACGCCGCAGTTCGACTGGGCCCGCACCCATGTCCGCGGACGCCCGCAGCCCGTGCCCCCGATCCATACCCCCGAGGCCGTGGCCGAAGCGATCGCCGCCGCGGCCCGCACGGCCCCGCGCGAGATCTGGATCGGCGCGCCCTCGATGCAGGCGATCCTCGGCACGATGGTGGCGCCGGGCCTCATGGACCGGATGATGGCGCGCAGCGCCTGGGACAGCCAGATCGGTCCCGGAGACGCCCGCGCAGACAATCTCATGCAGCCGGTCGAGCGTGACATGGGCGCCGCAGGCCGCTTCGGCTCCGAAGCGTCCGACCGGGTCGCGAGCCTCTCCGGCCCCACCGTCCGCGCAGGCCTTGCGGCCGGCGGCGTGCTGGTCGCGGCCGCGGCCCTCACCGCCGCAGCGCTCCTCGCCCGCCGCCGCGACCCATGA
Protein sequence:
MQDRPVVVITGGTAGVGRALARAYAHRGWRVAVLARGQAGLAATAADVARAGGEPLTLAADVADSAAVFDAADRVVARWGRIDLWINNAMVTVFGPAERATPEEYARVTAVTYLGTVHGTLAALRHMRPRDRGTILQIGSALAYRSIPLQAAYCAAKAACRGFTDSLRSELLHEKSRIRLTMAQLPAVDTPQFDWARTHVRGRPQPVPPIHTPEAVAEAIAAAARTAPREIWIGAPSMQAILGTMVAPGLMDRMMARSAWDSQIGPGDARADNLMQPVERDMGAAGRFGSEASDRVASLSGPTVRAGLAAGGVLVAAAALTAAALLARRRDP
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 34871 | 332 | 10.43 | 0.05 | 37.91 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: Nicotiana benthamiana | Disease name: Bacterial wilt |
| Host classification: Eudicots | NCBI Species: 4100 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR036291,IPR002347
Pfam: PF00106
SMART: SM00822
KEGG: rsp:RSP_0028
PRINTS: PR00081,PR00080