Effector profile
PlantPEAD ID: PlantPEAD01270 Uniprot ID: A5CRN8 Source: Database
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 28447 Pathogen type: Bacteria
Species: Clavibacter michiganensis Strain: subsp. michiganensis strain CMM101 Other name:
Gene name: ChpE (CMM_0039) NCBI Gene ID: AM711867
Entry name: UPPP_CLAM3 Protein name: Undecaprenyl-diphosphatase
DOI:
Gene/Protein information
Gene sequence:
TTGAGCTATCTCGAGGCGATCATCCTGGGCCTCGTCCAGGGTCTGACCGAATTCCTGCCCATCTCCTCGAGCGCGCACCTCCGCATCGCCGGGCTCTTCATGGGCGGCGACCCGGGCGCCACGTTCACCGCCATCACGCAGCTCGGCACCGAGCTCGCGGTCGTGGTGTTCTTCCGGAAGCGCATCGGCAAGGTCCTCTCGGCCTGGTCCCGCTCGCTCCGCGGCGGCATGCCGAAGGGCGACCCGGACGTGCGCATGGGCTGGCTCGTCATCATCGGCACCATCCCCATCGGCATCGCGGGCTACCTCTTCCAGGACACCATCCGCTCCACGTTCCGCTCGCTCTGGATCGTCGCGATCGTGCTCATCGTCTTCGGCATCCTGCTCGGCCTCGCCGACCGCTACAGCCGCAGCGACCGCCTCGAGAAGGACATGACGTACGGGCACGGCGTGAGCATCGGCATCGCGCAGGCGCTCGCCCTCGTCCCCGGTGTCTCCCGCTCGGGCGCGACCACCACGGCCGCGCGCGCGTTCGGCTACTCCCGGCCGGTCGCCGCGGAGTACTCGTTCCTCCTCGCCGTGCCCGCCGTCTTCGGCAGCGGCCTGTACGAGCTCGTGAAGAGCTTCGACGAGACCGGCCAGGCCGGCGCCGGGCAGACCGCGGTCGCGACCCTCATCGCGTTCATCGTGGGCCTCGCGGTCATCGCGGGCCTGATGCGGTACATCTCCACCCGCACGTTCATGCCCTTCGTGGTCTACCGCGTCGCCCTCGGCGTCGTGCTCCTGGTGCTCCTCGGCACCGGCGCGATCGCGGCCTGA
Protein sequence:
MSYLEAIILGLVQGLTEFLPISSSAHLRIAGLFMGGDPGATFTAITQLGTELAVVVFFRKRIGKVLSAWSRSLRGGMPKGDPDVRMGWLVIIGTIPIGIAGYLFQDTIRSTFRSLWIVAIVLIVFGILLGLADRYSRSDRLEKDMTYGHGVSIGIAQALALVPGVSRSGATTTAARAFGYSRPVAAEYSFLLAVPAVFGSGLYELVKSFDETGQAGAGQTAVATLIAFIVGLAVIAGLMRYISTRTFMPFVVYRVALGVVLLVLLGTGAIAA
Protein structure:
AlphaFold
download
Loading ...
Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
28754.9 272 9.86 0.755 30.26
Plant infestation information
Experimental plant:
Susceptible plant: Solanum melongena, Solanum lycopersicum Disease name: Bacterial canker
Host classification: Eudicots NCBI Species: 4111, 4081
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.