Effector profile
| PlantPEAD ID: PlantPEAD01283 | Uniprot ID: Q3BYK6 | Source: Database |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 339 | Pathogen type: Bacteria |
| Species: Xanthomonas campestris | Strain: pv. vesicatoria strain 85-10 | Other name: |
| Gene name: HrcU | NCBI Gene ID: AM039952 | |
| Entry name: Q3BYK6_XANC5 | Protein name: Flagellar biosynthetic protein FlhB | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGTCGGAAGAAAAAACCGAGAAGCCGACCGAGAAGAAACTGCGGGATGCGCGCAAGGACGGGGAAGTTCCGGTCAGCCCGGACGTCACTGCAGCGGCGGTGCTCTTCGGCGCGTTATTGGTGATGAAATCGGCCGGCGATTACTTCTCCGATCACATGCGCGCATTGATGACGATCGGCTTCGATTTTTCCGAACATACACGCGATGCAGCGGCCATCAACCGCGCACTCGGCCATATCGGCATCCAGGGATTGCTGTTGATGCTGCCGTTCCTGGCTGCCTGCCTGGTGGCCGGTATGGCGGGCGGTGCGTTCCAGACTGGCCTGAATGCCTCGCTCAAGCCGGTGGCGCCCAAGTTCGATTCCCTCAATCCCGCAACCGGGGTCAAGAAACTCTTTTCGTTGCGAAGCCTCATCAACTTGCTGAAGTTGATCATCAAGGCCATCTTGATTGGCGTGGTGCTGTGGGTCGGTATCCGCGCCCTCATGCCGATGATCATTGGGCTTGCCTACGAGACACCGCTTGACGTTGCGCAAATTGCCTGGCGCACCCTGGGCATGCTCTTCGCACTGGGCGTGCTGCTGTTCGTCCTGGTCGGCGCTGCAGACTGGAGCGTGCAGCGCTGGCTGTTCATCCGCGACAAGCGAATGAGCAAGGACGAGCAGAAGCGCGAAGTCAAGGAAAGCGAGGGCGACCCCGAAATCAAGGACAAGCGCAAGGAATTCGCCAAGGAGCTGGTCTTCGGCGACCCGCGCGAGCGCGTGGCCAAGGCCAAGGTGATGGTGGTCAACCCGACCCATTACGCAGTGGCGCTGGCCTACGAGCCCGACGACTTCGGCTTGCCGCAGGTCGTTGCCAAGGGCGTGGACGACGGCGCACTGGAACTGCGCGCCTTCGCGCATAACCAGGGCATTCCGATCGTTGCCAATCCGCCACTGGCGCGTGCGCTGTATCAGGTTGAATTGGGCGATGCAATCCCCGAGCCACTGTTCGAAACGGTTGCGGTGGTGTTGCGCTGGGTCGATGAACTCGGTCGCGACCACGGCGACGGCGATGGAGCCCTGCCATGCTAG
Protein sequence:
MSEEKTEKPTEKKLRDARKDGEVPVSPDVTAAAVLFGALLVMKSAGDYFSDHMRALMTIGFDFSEHTRDAAAINRALGHIGIQGLLLMLPFLAACLVAGMAGGAFQTGLNASLKPVAPKFDSLNPATGVKKLFSLRSLINLLKLIIKAILIGVVLWVGIRALMPMIIGLAYETPLDVAQIAWRTLGMLFALGVLLFVLVGAADWSVQRWLFIRDKRMSKDEQKREVKESEGDPEIKDKRKEFAKELVFGDPRERVAKAKVMVVNPTHYAVALAYEPDDFGLPQVVAKGVDDGALELRAFAHNQGIPIVANPPLARALYQVELGDAIPEPLFETVAVVLRWVDELGRDHGDGDGALPC
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 38916.5 | 357 | 6.13 | 0.163 | 34 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: Capsicum annuum, Solanum lycopersicum | Disease name: Bacterial leaf spot |
| Host classification: Eudicots | NCBI Species: 4072, 4081 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR006307,IPR006135,IPR029025
Pfam: PF01312
SMART:
KEGG: xcv:XCV0426
PRINTS: PR00950