Effector profile
| PlantPEAD ID: PlantPEAD01295 | Uniprot ID: A1TM76 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 80869 | Pathogen type: Bacteria |
| Species: Paracidovorax citrulli | Strain: Aac5 | Other name: Acidovorax citrulli |
| Gene name: Tssm | NCBI Gene ID: CP000512 | |
| Entry name: A1TM76_PARC0 | Protein name: ImcF domain protein | |
| DOI: 10.3390/ijms23179632 | ||
Gene/Protein information
Gene sequence:
ATGCTGCGCAAGATCTTTTCATTCTTCTTCAACCGGTTCACGCTGGTGCTGTGCGGCCTGGTGCTGCTCAGCCTGCTGGTCTGGTTCGTCGGTCCGCTGGTCTATATCAAGCCCTACCAGCCGCTCGAGAGCGAGGCGGTGCGCGGCTGGATCATCGCCGCGCTGTTCGGCATCTGGTTCCTGCGGCTGTTCATCCGGTGGTGGCGGGCCAAGGAGATGAATGCACGCCTGCTGGGCCAGCTGGCCCGCATCGGCGCATCGGATGCCTCCGCCCCCGAGGCCGGTCCCGGCAAGGAGGAGGTGGCCGAACTCGAGAAGCGCTTCAAGGAGGCGGTCGATGTCCTGGGCAAGACCCGCTTCGGGCAGACGGAGCAGGGCTGGTTCGGCCGGCTGTCCCGCCGCTACCTCTACCAGTTGCCCTGGTACCTCATCATCGGTTCTCCGGGATCCGGCAAGACCACGGCACTGGTCAATTCGGGCCTCGATTTTCCTCTGGCCGCCCAGTTCGGCAAGGCGTCGATCCGCGGCGTCGGCGGCACGCGCAACTGCGACTGGTGGTTCACCGACCAGGCCGTGCTGCTGGATACCGCCGGCCGCTACACCACGCAGGAGAGCGACGAGGCGCAGGACAGTGCCGCCTGGTCGGGGTTCCTCGGCCTGCTGCGGCGCTTTCGCGGGCGGCAGCCCATCAACGGGGTGCTGGTCACCCTCAGCGTGCAGGAGCTGCTGAGCGGCGGCGATGCGGAGCGCGAGCGCCTGGCCCGGCTGATCGGCCTGCGCCTGGCCGAGCTGTGCGAGGGGCTGTCCATCAAGTTCCCGGTGTACGTGCTGGTCACCAAGACCGACCTGCTGGCCGGCTTCAACGAGTTCTTCGGCAACATGACCCGCGAGGAGCGGGCACAGGTCTGGGGCTTCACCAATCCCTATGTGGAAGGGCAGGCGCAGGAAGACCCGGGGCTGCAGTTCCGCAAGGAATTCGACGGCCTGGCCGACCAGATCAACCGGTTGCTGCCGCAGCGCCTGCTGGCGGAGCCCGACCTCGCGCGCCGTGGCCAGATCTATGGCCTGCCGCAGCAGTTCGTCGGCCTGCGGGACGTGGTCCAGCAGACGCTGTCCACGATCTTCGCGTCCTCGCGTTTCAAGGAAAAGCCGCTGTTCCGCGGCGTCTATTTCACCAGTGGCACGCAGGAGGGCATGCCGTTCGACCGGGTGCTGTCCGCCCTGTCGCGGCGCTTCTCGGTGGCGCCTCCGGCCCATCCCGCCGGGGAAGGGCGCGCGGGCAAGAGCTATTTCATCGAGACCCTGCTCAAGGGGGTCATCTTCAACGAGGCCGGGCTGACGGGACGCAATGCCAAGAAGGAGCGCCAGTTGCGGCTGCTGCAGGCCGCCGGCTTTTTCGCCCTGGCCGCGGGGCTGGCGGGCGCCACGATCGCCTGGACGATCAGCCACGGCAACAACCAGAAATACCTGGACGAGGTGGCCGCGAAGGTGCCCACGCTCAAGCAGGCGGTGGAGGAATCCCGCGACGCGGATCCCGAGAACATGGTGGCGCTGCTGCCGCTGCTGAACCACGCCGAGGCCCTCGCCGTGAGCCAGCGCTACACCGGCGATTCGCCGCCGCTCAGCTGGCGCTACGGATTGCTGCAGGTGCCCAAGGTGCAGACCGCTGCCGACGCGACCTACATGCGGCTGCTGGAGGATGCGTGGCTGCCCCGCCTCGCGCGGCACCTGCGCAATTCGCTGCAGCAGGCCTCGACGGCCAACCCCGAGGCCAGCTACGAGGCGCTCAAGGTCTATCTGATGCTCTACGATCCGGAGCGCTTCAACCCCCGCGTGGTGAAGGCCTGGATGCTCAACGAGTGGGAAGCCACGCTGCCCCCGGCCCTGGTGCAGTCGGGCATGCTGGACCAGCTGGCGCACCACCTCGACCGGCTCATGGAAGACCGTGCCCTGGTTTCGCCGATTCCGATAGACCAGCCGCTGGTGGACGAGGTGCGCCAACGGCTGGCGCAGCTGTCGCCTGCGCAGCGGGCCTACAGCCGGCTGAAGCAGTTGCTGACCACGGGCACGGCGCTGCCGCCGGACTTCACGCTGGTGCGGGCCGCCGGCCCCGAGGCGCCGCAGGTGTTCACGCGGCGCAGCGGCAAGCCGCTCACTCAGGGGATTTCTGGACTGTTCACCTACGACGGCTACTACGGCGTGTTCTCGCATGAGCTGCCCAAGGTGACCTCGCTGCTGGCGCAGGAGGAAACCTGGGTGCTGGGCAAGGCGCAGGGGCAGCGCAGCGTGGCCAACGAGGTCATGACCGGGCAGCTCGCGCTCGAGGTCAAGCGCCTCTACCTCATGGAGTACGCCAAGGTCTGGGAGGACTTCCTCGCCGATGTGCGGCCCGTGCAGGTGGCGTCGCTCGACCAGGCCGGCGAGCAGGCGCGGCTGTATTCGTCCGCCAATTCCAGCCTGGAGCAGTTCATCCGCGCGGTGGCCAAGGAAACCACGCTGGGTCAGAAGCCGGGGGCCGGCGGCAGCAGCACCAGCAGCTGGCTGGGCGAGAAGATCAACCGCATCAAGGAGGAGCAGGAGCAGCTCAGCCGCCTCACCGGCAAGCGGGTGAACATCGGCGGGCTCGCGGCCAGCACCAACCTCGAGGCCGATCTGGTGGACTTCCGCTTCCGCGAATACCGCCGTCTCGCCACCTCCAACGGATCGGGCCCGGCGCCCATCGCCGCCAGCCTGCAGGTGCTCAACGAAGCCGCCGCGGTCATCTCGTCCGCGCGCCAGCAGATCAGTGCCGGCGGCACCGTGCCGCCGTCGCTCTCGCCGGCCCTGGAGCGCGTGCGCATGGAGGCCAAGCGCGTGCCGCCGCCCCTCAACACCATGTACGAGGATCTGGCATCGTCCACGTCGGCCATGGTAGGCCGCGACGTGCGTGCCACCGTGGGCAGCAACCTCAATGCCACCATCGGGACGTTCTGCCGCAGGGCGATCGGCGGCCGCTATCCCTTCACCAAGGGATCGGCCAGCGACGTGACGAGCGACGACTTCGCCAGCCTGTTCTCGCCGGGCGGCATGATGGACGAGTTCTTCCGCAACACCCTGCAGCCGATGGTGGACATCTCCACCACCCCCTGGCGCTTCCGCCAGGGTGTCGATGGGACGCCGGTCGGTGGATCGGCCGCGCTGGCCTCGTTCCAGCGCGCCGCGACCATCCGCGACGTGTATTTCCGGGCGGGCGGCAAGGTGCCGTCCATCCGCATGGACATCAAGCCGCTGGAAATGGACGCCTCCATTTCGCAGATGGTGCTGGACATCGACGGCGAGGTGCTGCGCTACCAGCACGGCCCGCAGATCCCGAAATCGATGGCCTGGCCCGGCACCCGGGGCACGGGCCAGGTCCGCCTGCAGATCACCGGGGGCGGTGCCGAGAACACGGGCCTGGTGACCGAGGGACCCTGGGCCGTGCACCGTTTCTTCGACAAGGCCCAGATTCTGCCGGGCAGCACGCCCGAGCGCTTCGTCGCCGCCTTCGATATCGGCGGGCGCAAGCTGCGCTTCGAGGTCACCACGGGCAGCGTGCTCAACCCGTTCCGTCTCAAGGCCATGGAGGAGTTCGCGTGTCCTGGCAATCTCTGA
Protein sequence:
MLRKIFSFFFNRFTLVLCGLVLLSLLVWFVGPLVYIKPYQPLESEAVRGWIIAALFGIWFLRLFIRWWRAKEMNARLLGQLARIGASDASAPEAGPGKEEVAELEKRFKEAVDVLGKTRFGQTEQGWFGRLSRRYLYQLPWYLIIGSPGSGKTTALVNSGLDFPLAAQFGKASIRGVGGTRNCDWWFTDQAVLLDTAGRYTTQESDEAQDSAAWSGFLGLLRRFRGRQPINGVLVTLSVQELLSGGDAERERLARLIGLRLAELCEGLSIKFPVYVLVTKTDLLAGFNEFFGNMTREERAQVWGFTNPYVEGQAQEDPGLQFRKEFDGLADQINRLLPQRLLAEPDLARRGQIYGLPQQFVGLRDVVQQTLSTIFASSRFKEKPLFRGVYFTSGTQEGMPFDRVLSALSRRFSVAPPAHPAGEGRAGKSYFIETLLKGVIFNEAGLTGRNAKKERQLRLLQAAGFFALAAGLAGATIAWTISHGNNQKYLDEVAAKVPTLKQAVEESRDADPENMVALLPLLNHAEALAVSQRYTGDSPPLSWRYGLLQVPKVQTAADATYMRLLEDAWLPRLARHLRNSLQQASTANPEASYEALKVYLMLYDPERFNPRVVKAWMLNEWEATLPPALVQSGMLDQLAHHLDRLMEDRALVSPIPIDQPLVDEVRQRLAQLSPAQRAYSRLKQLLTTGTALPPDFTLVRAAGPEAPQVFTRRSGKPLTQGISGLFTYDGYYGVFSHELPKVTSLLAQEETWVLGKAQGQRSVANEVMTGQLALEVKRLYLMEYAKVWEDFLADVRPVQVASLDQAGEQARLYSSANSSLEQFIRAVAKETTLGQKPGAGGSSTSSWLGEKINRIKEEQEQLSRLTGKRVNIGGLAASTNLEADLVDFRFREYRRLATSNGSGPAPIAASLQVLNEAAAVISSARQQISAGGTVPPSLSPALERVRMEAKRVPPPLNTMYEDLASSTSAMVGRDVRATVGSNLNATIGTFCRRAIGGRYPFTKGSASDVTSDDFASLFSPGGMMDEFFRNTLQPMVDISTTPWRFRQGVDGTPVGGSAALASFQRAATIRDVYFRAGGKVPSIRMDIKPLEMDASISQMVLDIDGEVLRYQHGPQIPKSMAWPGTRGTGQVRLQITGGGAENTGLVTEGPWAVHRFFDKAQILPGSTPERFVAAFDIGGRKLRFEVTTGSVLNPFRLKAMEEFACPGNL
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 133377 | 1209 | 9.23 | -0.175 | 34.27 |
Plant infestation information
| Experimental plant: Citrullus lanatus (related: watermelon) | |
| Susceptible plant: Citrullus lanatus | Disease name: Bacterial fruit blotch |
| Host classification: Eudicots | NCBI Species: 3654 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR009612,IPR010623,IPR027417,IPR017731,IPR025743
Pfam: PF06761,PF14331,PF06744
SMART:
KEGG: aav:Aave_1473
PRINTS: