Effector profile
PlantPEAD ID: PlantPEAD01301 Uniprot ID: A0A224AJ79 Source: Article
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 305 Pathogen type: Bacteria
Species: Ralstonia solanacearum Strain: HA4-1 Other name: Ralstonia nicotianae, Pseudomonas solanacearum
Gene name: RipS6 NCBI Gene ID: LC312397
Entry name: A0A224AJ79_RALSL Protein name: Type III effector protein
DOI: 10.3389/fpls.2023.1075042
Gene/Protein information
Gene sequence:
GTGTCCGTTCACGAGTGTGTGGATCTGGCTTGTGCCAACGTACTGGCCAAGCGCAACGGTTACGGTCTGGCGCTGGTCTTCCTGGCGGCAGGCGCGACGCCCGAAGAGAATGTGCGGCAGTTGACGAACTACTTCTTCGCGTTGCAAGCGGCCTCGCTCCGGGCCAGTCAGCCGGAACGGCGTCAGCTGGGCCAATGCGCTGATCTCGCTGCGCACTATCTGTTCAAGACACCGTGGTTTGCGCGCGCGCCGTTGCGGCCATTCGTCATGCTGGGCAACCTGCTGAGCAAATATCCCGACCAACCGGCCTGTCTGCAGGCGCTGTCGTGGATCGCCGATCAAGTCCTGGCGCCTGCGCAGATGCCCGCTTTGGGCGAGAAAGACCTGGCCCTGTTGGCCAACGCCCTGTCGAAAAACAGCGGGTGCGGCCGGAGCGAACAGGCGGTTGCGCGGATCGGCCGACATGTGGTGCGCGCAGGTGCGGGGGATTTTCGCGCGCAGAGCGTCAGCCTGATGCTCAATGCCTGCAGCAAATGGTCCGGGAATGCCGATTGCCGGGATGCGGTTGAAGTCTTGGCCGCGCGCGTGTCGGAGGATGCCGCCCTGCAGCGCGACATGGCCGCGCAGGCCGTCGCCAACGCACTCAATGCGCTGAGCAAGTGGCCGGAGCGGATCGGGTGCCGGAATGCGGTCCTGGCCCTGGCCGTGCGCGTGGCGACCGATGTCGCTTTGCGGTGCCGCATGAAGCCCCAGGAGGTGGCCAATGCGCTCAATGCGCTGAGCAAGTGGCCGGACCGGATCGAGTGCCGGAACGCGGTCCTCTCCCTCGCCACGCATGTGGGGGAGCATGGCACGCTGCGGCAGGCGATGAATGCGCAACACGTCGCGAATGCGCTCAATGCGTTGAGCAAGTGGCCGGAGCAGGGCGAGTGCTGCGACGCCGCGCTGCCCCTGATCCGGCGCGTGGCGGACGATGCCGTGTTGCGGAGCAGCATGGACGCACTGGTCACGTCCAACGTGCTCAATGCACTGAGCAAGTGGCCGGACCGGGTCGAGTGCCGGGATACCGCGGTGACCCTGGCCTTGCGCGTGGCGGACGATGCCGGGTTGCGGCACGACATGGGCGTGCAGGCCGTGGCCAACGCGCTCAATGCGCTGAGCAAGTGGTCGGAGCAGGCAGGTTGCCGCGATGCGGCGCTGTCCCTGGCCGCGCGCATGGTGGGCGATGCCAGCCTGCGGCACGCCATGAGCGCGCAGAATGTGGCCAACACGCTCAGCGCCCTGAGCAAGTGGCCGGAGCAGGCGGGTTGCCGCGATGCGGTCTTGTCCCTGGCCGCGCGGGTCGCCGACGATGCCGCGCTGCGGCTCGACATGAACGCACAGAATGTCGCGAACGTGCTCAACGCGTTGAGCAAGTGGCCGGAGCGCGGCGAGTGCCGGGATGCGATGCTGTCCCTGGCGTCGCGCGTGGCGGACGATGCCGCGCTTCGATACGACATGAGCGCGCAGGCCGCCGCAAACGCGCTCAACGCGTTGAGCAAGTGGCCGGCGCAAACGGGCTGCCGGGATGCGGCGCTGCGCCTGGCCGCGCGCGTGGCGGAGGACGTCGCCCTGCGGCACAGCATGGACGCGCAACAGGTCGCCAACACGCTGAACGCGCTGAGCAAGTGGCCGGAGGCGTCTTCTTGCCGTCAAGTCACCTTGTTGTTGATGCGATCGCTGGGCGAGTCGGGCTGTCCATGGCGCCAGTTCAACATGATCAATCTGGCCCAGATCGCCAATGCATCGGCGCGTTTGTTCCTCTCGGCTTCCGATGAAGTCGAGATCCAGGCACTGGCGCGCACCAAGCTCAGGGCACTGGCGGCCCACCTCGGCTTGCACCGGGAGCGCTTCGAGACGGCCTCCGCAAGCAGCATCGGTACGATCTTCAAGGCGATGGAGGCGCTGCACCTGCAGGCGGAAATGCGCTCGCTGGTCTGCGCTGCCATGAACCGGATCGAGCGCCTATGCAGCCAGGCCAGCTTGCGCAGCGAGAGTCGGGAGTCACTCGGCATGCTCCGCGCGGGCTTGCTGCCGTACATCGACACAAACCGGGGCCTTTCCGATTCACCCGGCATGTTGGAGGCCGCTGCGCCGCGACTGAAGGCATGGGCTGCCCGGCATCGCCTGGAAATCGATCTTTAG
Protein sequence:
MSVHECVDLACANVLAKRNGYGLALVFLAAGATPEENVRQLTNYFFALQAASLRASQPERRQLGQCADLAAHYLFKTPWFARAPLRPFVMLGNLLSKYPDQPACLQALSWIADQVLAPAQMPALGEKDLALLANALSKNSGCGRSEQAVARIGRHVVRAGAGDFRAQSVSLMLNACSKWSGNADCRDAVEVLAARVSEDAALQRDMAAQAVANALNALSKWPERIGCRNAVLALAVRVATDVALRCRMKPQEVANALNALSKWPDRIECRNAVLSLATHVGEHGTLRQAMNAQHVANALNALSKWPEQGECCDAALPLIRRVADDAVLRSSMDALVTSNVLNALSKWPDRVECRDTAVTLALRVADDAGLRHDMGVQAVANALNALSKWSEQAGCRDAALSLAARMVGDASLRHAMSAQNVANTLSALSKWPEQAGCRDAVLSLAARVADDAALRLDMNAQNVANVLNALSKWPERGECRDAMLSLASRVADDAALRYDMSAQAAANALNALSKWPAQTGCRDAALRLAARVAEDVALRHSMDAQQVANTLNALSKWPEASSCRQVTLLLMRSLGESGCPWRQFNMINLAQIANASARLFLSASDEVEIQALARTKLRALAAHLGLHRERFETASASSIGTIFKAMEALHLQAEMRSLVCAAMNRIERLCSQASLRSESRESLGMLRAGLLPYIDTNRGLSDSPGMLEAAAPRLKAWAARHRLEIDL
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
78344.9 727 8.76 -0.025 40.74
Plant infestation information
Experimental plant: Solanum albicans (no common name found)
Susceptible plant: Solanum melongena, Solanum lycopersicum, Solanum tuberosum Disease name: Bacterial wilt
Host classification: Eudicots NCBI Species: 4111, 4081, 4113
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.