Effector profile
| PlantPEAD ID: PlantPEAD01304 | Uniprot ID: S6TW99 | Source: Database |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. actinidiae strain AH.01 | Other name: |
| Gene name: HopF2 | NCBI Gene ID: AOKG01002484 | |
| Entry name: S6TW99_PSESF | Protein name: Type III effector HopF2 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAGTACCATACCTGGCACCTCGGGCGCTCACCCGATTTATAGCTCAACTGCCATCCCACGAAACATGTCAGGCTCGCCCACACCGAGTCACCGTATTGGCGGGGAAACCCTGACCTCTATTCATCAGCTCTCGGCCAGCCAGAGAGAACAGTTTCTGAATACTCATGACCCCATGAGAAAACTCAGGATTAACAATGATACGCCACTGTACAGAACAACCGAGAAGCGTTTTATACAGGAAGGCAAGTTGGCCGGCAATCCAAAGTCTATTGCACGCGTCAACTTGCATGAAGAACTGCAGCTTAATCCACTCGCCAGTATATTAGGGGACTTACCTCACGAGGCAAGCGCTTACTTTCCGAAAAGCGCCCGCGCAGCGGATCTGAAAGACCCTTCATTGAATGTCATGGCAGGCTCTCGGGCACAAAATGCGATTCGCGGCTACGCCCATGACGACCATGTGGCGGTAAAGATGCGACTGGGCGACTTTCTTGAGAAAGGCGGCAAGGTCTATGCGGACACTTCGTCAGTCATTACCGGCGGAGAGGAGGCGAGCCCGCTGATCGTTACATTGCCTAAAGGACAAAAAGTCCCAGTCGAGATTATCCCTACCCATAACGACAACAGCAACAAAGGCAGAGGCTGA
Protein sequence:
MSTIPGTSGAHPIYSSTAIPRNMSGSPTPSHRIGGETLTSIHQLSASQREQFLNTHDPMRKLRINNDTPLYRTTEKRFIQEGKLAGNPKSIARVNLHEELQLNPLASILGDLPHEASAYFPKSARAADLKDPSLNVMAGSRAQNAIRGYAHDDHVAVKMRLGDFLEKGGKVYADTSSVITGGEEASPLIVTLPKGQKVPVEIIPTHNDNSNKGRG
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 23249.2 | 215 | 9.33 | -0.544 | 33.03 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: Actinidia chinensis | Disease name: Kiwifruit bacterial canker |
| Host classification: Eudicots | NCBI Species: 3625 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR015226
Pfam: PF09143
SMART:
KEGG:
PRINTS: