Effector profile
| PlantPEAD ID: PlantPEAD01308 | Uniprot ID: A0A7U7JFJ7 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 305 | Pathogen type: Bacteria |
| Species: Ralstonia solanacearum | Strain: IPO1609 | Other name: Ralstonia nicotianae, Pseudomonas solanacearum |
| Gene name: RipD | NCBI Gene ID: NONE | |
| Entry name: A0A7U7JFJ7_RALSL | Protein name: Type III effector protein RipD | |
| DOI: 10.1111/mpp.13360 | ||
Gene/Protein information
Gene sequence:
NONE
Protein sequence:
MGNLQIKPSPALYIPLPDSTPESPGSQTSTPKLTRVASPTGALANLPTRESGKLPKVSVQVASPKAASAGSSQAASASLPVSYPEPPELASLSASSEAGETPETLGAVTISGRLHINKAGELTSNNETIRNLLRYLGDDALRFADELNNMQVTIRPNPAAVAAYEALQLHCDVETALLRSADKQSSHQPARNAQQEPLLSPPPGSPLKKEKIEGNVLMPLLINVIEHGANAFDTNDQMPDMDMTVHQFLATLAPLVDISNPRTKASDPELGMMLSDKLRKNADAAAKLGAATLFQMATNKTFAVKELGMSLAVSSGLGTLWELGGSELIKNALKTLNLSPTRYALAAAGIDSVPPIVIETMDSAIVLSAVRSMNRATASFLQRVRDALPAATVAGFKSALGAYANNLLQYIGTGSYPADLALNTAATELAILSAASGIPGEVKENAANMKAAIVEQMRTGLLKAPPSEPHISHEEYTRQLKAHVQKVAQRALDLSPGDGIAQKSLAFASLVGLIPLGLSDKVANLVPESALRIVRSTIFNPIESIGMNTLVASSKINIPGVMTSDAKKHEQITNRILQEATLGKPLQDGEVHKVFQQWDGLNRAGRAILEGMSITMDALPNRVARMFTNETPLEQRIAYDSIDNSKV
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 68538.4 | 647 | 6.26 | -0.116 | 43.19 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress) | |
| Susceptible plant: Solanum melongena, Solanum lycopersicum, Solanum tuberosum | Disease name: Bacterial wilt |
| Host classification: Eudicots | NCBI Species: 4111, 4081, 4113 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: