Effector profile
| PlantPEAD ID: PlantPEAD01337 | Uniprot ID: P35651 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 305 | Pathogen type: Bacteria |
| Species: Ralstonia solanacearum | Strain: GMI1000 | Other name: Ralstonia nicotianae, Pseudomonas solanacearum |
| Gene name: HpaP | NCBI Gene ID: AJ245811 | |
| Entry name: HPAP_RALN1 | Protein name: HRP-associated protein | |
| DOI: 10.1111/mpp.12119 | ||
Gene/Protein information
Gene sequence:
ATGACGCAAGCCGTCCGCCTCTGGCGCCCCCAGCCGGTCGACCCGGCCCCGCCCACCCGGCGCCGCACGCCGCTGCGGACACCGGGCCCGCATGACGCGCTGCCCTATGTGCCGCCGCCCCGCCCCGAGCCCCCGGAGCCCGTCGAGGACGACTTCCCGGAGCCCCGGCAGGACACCCCGGCCAGCGATCCGCCCCCCGAGGCGCGCACCGACGCCAGCCCACCGCAGCCCGCCGCCGACCCCGATGCCTCGCTCCACACCGCGGCCATCGCCAGCCGCCTGGTGCGGACCTGCTCGGAGATCGGCGCGGGCGAGACCATGACCGAGCACCTTGCCCGGCTGCTCTCCCAGTTCTGTGCCTCGCAGGCGATCCGCTCCGGCGGCGAATGCTGGGAAATCTCACTCGATCTTGATCCCAAGATCCTGCCCGAAACCCGCCTCACGCTGCGGCTTTCGCCGCACACGCTATCGCTTCGCTTCGAGGCCGGACACCCTCGCTCCCGGCACTTACTCTCCGAACATGGCGACACGCTGCGTCAGCGCATCCACGCGCTGCTGCGGCAGCAAGTCGATGTCGAACTCGAACTCTGGTGA
Protein sequence:
MTQAVRLWRPQPVDPAPPTRRRTPLRTPGPHDALPYVPPPRPEPPEPVEDDFPEPRQDTPASDPPPEARTDASPPQPAADPDASLHTAAIASRLVRTCSEIGAGETMTEHLARLLSQFCASQAIRSGGECWEISLDLDPKILPETRLTLRLSPHTLSLRFEAGHPRSRHLLSEHGDTLRQRIHALLRQQVDVELELW
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 21959.8 | 197 | 5.74 | -0.673 | 72.45 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress), Solanum lycopersicum (related: tomato) | |
| Susceptible plant: Solanum melongena, Solanum lycopersicum, Solanum tuberosum | Disease name: Bacterial wilt |
| Host classification: Eudicots | NCBI Species: 4111, 4081, 4113 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR013390
Pfam: PF09483
SMART:
KEGG: rso:RSp0862
PRINTS: