Effector profile
PlantPEAD ID: PlantPEAD02030 Uniprot ID: A0A399NB99 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 28447 Pathogen type: Bacteria
Species: Clavibacter michiganensis Strain: Other name:
Gene name: NCBI Gene ID: QWEC01000527
Entry name: A0A399NB99_9MICO Protein name: Polyketide synthase
DOI:
Gene/Protein information
Gene sequence:
CCGGCGCCTCGTGCTCGACGCGGCGTGCGCATCCGGCCTCTACGCCGTGCGCCTCGCCTGCGACGCGCTCGCGCTCGGCACGGCCGACACGGTCGTCGCGGGCGCGGTCTGCGCGCCCGACCTGCCGCTGCTCCACCTCTCCTTCTCCGACCTCGGCGCGTACGGGCGCGGCGCCTCGGCGCCGTTCCGCGCGGACAGCACGGGGATCCTCACGGGCGAGGGCGCCGCGGTCGTGGTCCTCCGCCGGCTCGACGACGCCCTGCGCGACGGCGACGAGGTGCTCGCGGTGATCGAGGGATCCGCCCTCGTCAACGACGGCGCCGGCCAGCACCCGCTCGTGCCGGGCCAGGCGGGGCAGCGCACCTGCTACGACCTCGCCTACGCCGACGCGGGCCTCGCGCCGACCGACGTCGACTACATCGAGTGCCACGCCACGGGCACGCCCGTGGGCGACCGCACCGAGCTGGCGTCGCTCACGGCGGCCTTCGGCGAGCGGATGCCGCTGCTCGGATCCGTGAAGGGCAACATCGGCCACCTGCTGACCGCCGCGGGGATCACGAGCCTCATCAAGGTCGTGCTCGCGATGCGCTCGGGGACCATCCCGCCCACGGTCGGCGGCGCGACCGACGCCCCGTTCCTCCACCCGCGCGTGGTCGGCGCGCCCACCCCGTGGCCCGCGACGGACGGACCGCGCCGCGCGGCCGTCTCCGCGTTCGGGTTCGGCGGCGCGAACGCGCACCTCGTGGTGTCGCACGACCCGGCGGGCGAGCGGGCGGCTGGCGCGGCCGAGGCGACCGCGGACGACGCTGCGCGACCGACCGGATCCGGGCGCCTGCCCGCCGTCGCCGTCACGGGCGTCGGCGCCTACGTGGGCGCAGGTGCGCGCGTCGCGGACCTCGCGCACGCCGAGGGCAGCGGCGACATCGCCGCTCTCGCCGGTGCCGACACGGTCCCGCGCCTGCACGGCACTCCCGCCGACGGCCGCGCCCTCGGCCCCATCGCGCTCGACCCGATCGGCGACCGCATCCCGCCGCGCGACATCCCGCACCTCAACCCCGCGCC
Protein sequence:
RRLVLDAACASGLYAVRLACDALALGTADTVVAGAVCAPDLPLLHLSFSDLGAYGRGASAPFRADSTGILTGEGAAVVVLRRLDDALRDGDEVLAVIEGSALVNDGAGQHPLVPGQAGQRTCYDLAYADAGLAPTDVDYIECHATGTPVGDRTELASLTAAFGERMPLLGSVKGNIGHLLTAAGITSLIKVVLAMRSGTIPPTVGGATDAPFLHPRVVGAPTPWPATDGPRRAAVSAFGFGGANAHLVVSHDPAGERAAGAAEATADDAARPTGSGRLPAVAVTGVGAYVGAGARVADLAHAEGSGDIAALAGADTVPRLHGTPADGRALGPIALDPIGDRIPPRDIPHLNPAP
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
35258.8 354 5.18 0.21 27.72
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.