Effector profile
PlantPEAD ID: PlantPEAD02031 Uniprot ID: A0A399NQE3 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 28447 Pathogen type: Bacteria
Species: Clavibacter michiganensis Strain: CFBP 7493 Other name:
Gene name: NCBI Gene ID: QWEC01000195
Entry name: A0A399NQE3_9MICO Protein name: Type I polyketide synthase
DOI:
Gene/Protein information
Gene sequence:
TGGCGGCGGCCGGCAGGAGCGCGTCGCGCTCGGCCTCCGTGATGGCGACCACGGCGATGCGGGGCGCGTCCGCGGAGATGGCGGTGCCGGACGGCGTGGGCGCCGCTCCCGCATCCAGCGCGGCGGCGAGCTCCTCGGCGGTCGGCGCGGTCCAGAGCCACACGGTCGGGCGGTCGAGCGCGTTGCCGAGCTCCCGCGACCTCGGGTGCTCCTCGAGCACGATGTGGAAGTTCGTGCCCCCGAAGCCGAAGGCGGACAGGCCCGCGCGGCGCACGGGCCGCTCGGGCGTCCGGAACCACGGCCGCGTCCGCGTGGCCACGTGCAGCGGGCTGCCCGTGAACGAGTCCGCGGGCTTCTCGACCTTGATGGTGGGCGGCAGGATCCGGTGCTGCAGCGCGAGCGAGAGCTTGATGAGGCCGGCGGCGCCCGCCGCGGCCTTGGTGTGCCCGATCTGCGACTTCACGGATCCGATGCCGATGGACGACTCCGACGCCCCGCTGTCGGCCAGCACCTCGGCCAGCGCGCTGAGCTCGGTGGCGTCGCCGACCGCGGTGCCCGTGCCGTGCGCCTCGATGATCGACACCGACGCGGGGGAGCAGTCGGCGTCCTCGTACGCCCGGCGGAGCGCGAGCTGCTGCCCGCTCGCCCGCGGCGCGTAGATGGACTTGTAGCGGCCGTCGCTCGCGGAGCCGATGCCGCGGATCACCGAGTAGATCCGGTTGCCGTCGCGCTCGGCGTCGTCGAGGCGGCGCAGCGCGAGCATGCCGATGCCCTCGCCGATCAGGGTGCCGTCGCTGGAGGCGTCGAACGGCCGCACGTCGCCCGTGGGGCTGAACGCGGGCGTCTTCGAGAAGCACAGGTACATGAAGATCGTGTTCTCGGCGTCGCAGCCGCCCGTGATCATCGTGTCGGCGCGGTGGTCCACGAGCTCGGCCGCGGCGGCGCGGAGGGCGCCGAGCGAGCTGGCGCAGGCCGCGTCCACCGTCATGTTCATGCCGCCGAGGTCGAAGCGGTTGGCCACGCGGCCGGCCACCACGTTGCCGAGCATCCCGGGGAACGAGTTCTCCTCCCAGGGGGCGAACCCGGCGCTGAAGCGGCGGGCGAGCTCGTCGGCGTCGGCCTCGCTCAGCCCGATCGAGCGCGCCGCCCGGCGCACGGCGGGGGTCTGCAGGCGGGCCGAGAGCGGCTGCGTCAGCTGGTTGGCGCCCGTGACGCCGAGCACGATGCCCGTGCGCTCGCGGTCGTACCAGCCGCTGCCCTCGGCGCGCGCGTCCTCCAGCACGTCGCGGGTGACGACGAGGCTGAGCAGCTGCAGCACGTCGGTGACGTCGAGCTGTGCCGGCGGGATCCCGAACTCGATCGGGTGGAACGGCACCGGGTCGATGAAGCCGCCGCGCTTGGCGTACGTCTTGTCCGGCGCCGACCGGTCCGCCGAATAGTGGTCGTCGACGTCCCAGTGCCATTCCGGGATGTCCCGGATGGAATCCACGCGATCGACGATGCCGTTCCAGAAGCCCTCCACATCGGAGGATCCCGGGAACAGGCTCGAAATGCCCACCACGGCGAGCGGGGTGCGCGCCAGGCGACGGTCGAGTTCCGCGTCGTCGGTATTCTCGTTCAT
Protein sequence:
MNENTDDAELDRRLARTPLAVVGISSLFPGSSDVEGFWNGIVDRVDSIRDIPEWHWDVDDHYSADRSAPDKTYAKRGGFIDPVPFHPIEFGIPPAQLDVTDVLQLLSLVVTRDVLEDARAEGSGWYDRERTGIVLGVTGANQLTQPLSARLQTPAVRRAARSIGLSEADADELARRFSAGFAPWEENSFPGMLGNVVAGRVANRFDLGGMNMTVDAACASSLGALRAAAAELVDHRADTMITGGCDAENTIFMYLCFSKTPAFSPTGDVRPFDASSDGTLIGEGIGMLALRRLDDAERDGNRIYSVIRGIGSASDGRYKSIYAPRASGQQLALRRAYEDADCSPASVSIIEAHGTGTAVGDATELSALAEVLADSGASESSIGIGSVKSQIGHTKAAAGAAGLIKLSLALQHRILPPTIKVEKPADSFTGSPLHVATRTRPWFRTPERPVRRAGLSAFGFGGTNFHIVLEEHPRSRELGNALDRPTVWLWTAPTAEELAAALDAGAAPTPSGTAISADAPRIAVVAITEAERDALLPAAA
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
57247.2 540 5.04 -0.128 39.12
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.