Effector profile
| PlantPEAD ID: PlantPEAD02898 | Uniprot ID: A0A4V1WMS6 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 119927 | Pathogen type: Fungi |
| Species: Alternaria tenuissima | Strain: FERA 1082 | Other name: |
| Gene name: | NCBI Gene ID: PDXA01000020 | |
| Entry name: A0A4V1WMS6_9PLEO | Protein name: Linear gramicidin synthase subunit D | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGTCCGTCATCGACACTACCAAGGACCTTTCGGCACTTTTCACGAAACAGGTCCATGCTACCCCGGATCTGATTGCGTTGGAAGACGACAATCATACATACACTTACCAAGAGCTCCACGACAAAGTCGCTGCCCTCGCCGAACGGCTGCGGGGCCATGGCGTCGGCCGTGACAGCTTGGTTGGTGTCCTGTTGCCGCGATCCGCCGACTATGTAATCGCCTGTCTAGCAGCACTACGGGCCGGTGGTGCATTTTTGGTCCTGGAACTGGCCTATCCTCCCGATCTCCTTGCGGACGTTCTCGAGGATGCTCAGCCGACTCTCGTGGTTACTATCAGCGCCGAAGTTGGCAAGATCAAGGGAAGCACCCCGCTTGTTGTTCTGGATGAAACCAGCTCAACTACGAACGGCCTGCTAGATGAGTCTGAGCTGAAGCCACTGCCTGAGGACACCGATTTGGACCGCTTGGCATTTGTTGCATACTCCAGTGGAACGACCGGTAAGCCGAAAGGCATCGCGAATCCACATCGAGCAGCAGTTCTCTCATATAACCTTCGCTTCGGGCTTTCGGACGTACAACCAGGCGATCGAGTAGCCTGCAATGTCTTTTTCGTGTGGGAAATTCTACGCCCGCTGCTGCGAGGTGCAACAGTTGTTGCTGTACCGGACGAAGCAAGCTATGACCCGCGCATGCTTGTCGATTTGCTTGCCTCGAAGAAGATCACCGAAACTCTCTTCACACCAACACTTTTCTCTGCCGTTCTTGCTCGTCACCAAGCGCTGGAGACGCGTCTGCCGAACCTGAAGACTGTTTGGCTAAACGGCGAAGTTGTGACCACCGACCTTGCACGTCGTGGTATCAAAGCTTTACCCAATACTCGCCTACTCAATGTATACAGCGCATGTGAGACACACGAGATTGCTTCTGGAGATATCAAGGATATGCTTGAGAAGCTGGATAAGGATGCCGCCTACTGTCCTGTGGGACCTCCCCTCATCGATAGGAAATACATCTATATCGTGGACGAGAGTGGCCAGAAAGTGGATGAAGGAGAGAACGGAGAGCTTTGCGTAGGTGGGCATTTGCTTGCTCGAGGATACCTAAATCGCCCGGAGACTACCGCCAAGGCTTTCATTCGGAATCAGTACAGCTCGAAGATCGGTGCTCGCATGTACAGGACTGGTGACAAAGCACGCCTTTTATCGAATGGGTTGCTCGAGATTACTGGCCGTGTTGGCGCTATGATCAAAATCCGCGGATACTCTGTGGTACCTGGAAAGGTCGAGAGCGCAATCCTCAACCACTTAGCTGTCAGCCATTGCGCTGTAGTACCCTTCGGGGAAGGCATTGACAGACAACTGGTTGCATACATTGTGAGGGACAAGGATACGTCTACAGAGCGTCCAGAAGTTGAGATCGACCGAACCGGCCGCAGCTCGACTGCCAGACGTATGTTGATGGCATATCTCGCCCACTATATGATACCCGCACTTTGGGTGGAGATGGATAGCCTTCCAACAAGCGACGTATCTGGGAAGGTTAATCTCAAAGCTCTTCCTCCTCCCAGGCCTGCATCTCCTACTGGAAGCGCACGAAAATTCGAGCAGAGCCCCATCTCCATCGAGCAGATTACGGAAATCTGGGCATCTATATTGAGCATCAGCCCAAGCTCCATTACCCCCGAATACAATTTCTTCGATCTAGGTGGTCACTCACTGCTACTTGCCGACCTGGCTGCGCGCTTATCAAACACATTCGGATTTAGGGTACCAGTGGCACGCCTCGCTACTCCAGCAACGCTTAATGGCCATCTGGACACTGTCCGTGCTATTCGTGACGGACATACCGCCGAAGTACAGGAAAATTTACCTGCTGTCTTACGTGCAGATTCTGTACTGGATAAGGAGATCCAGCCCAAAGATGCCAAGATGTGTGCGCTCAAAGATGCGAAGACCGTGCTACTTACTGGTGTCACCGGCTTCTTGGGTGCTTTCCTTCTCAGAGATCTACTCGAGAGCACGTCGGCTCAGATCGTATGCATGGTCCGGTTTGCCGATTCCTCACAAGACGATATACCTGCCGGTATTGCTAGGATACGCAGGAACCTGCTGGACTTTGGTCTGTGGAGCGATAGCATCATGGAGCGTGTCGAGATTCTTCCAGGAAACCTGTCGCGTAAGCGATTTGGTCTAGCTCCTGACACGTTCAAGACGTTGGCGGAACGCATTGATGTAATAGTCCATGCGGCTGCCACTGTCAACTTGGTTTATCCCTACGCTGCATTGCAGAAACCCAACGTTGGTGGTACAAGAGAGGTTCTTCGTCTTGCTGCTCAAGGCGGTGCCACCGTGCAGTATATTTCTACTAACGGAGTGCTCCTTCCTGCCAAAGGTCGTGAAGGGTGGTCAGAAGACGCTATGCTTGATGTTGATGAAGTAACCAAACTCGCCGATGGTTACGGTCAGACAAAGTGGGTGGCCGAACAGCTTGCTCTGGAGGCTGGTCGAAGAGGTCTTCCCATCAAGATCCACCGTCTTGGAACCATCAGTGGCCACAGCGAGACAGGTGCTGCTAACGCATGGGATCTGTTGACCGCCATGATTGTTGAGTCAGTCAGAATCGGCCACTATCCTGATGTCAAGGGCTGGCGTGCGGAGATGACCCCAGTCGACTTCGTCAGCAAGGCCATAATGCACCTCAGCAACCAAACCGAGACTGACCAAACCATTTTCCACATTGGAGACCCCGATCCAGTCGATGTCAGCAAGGTCTTCCAAGATCTCAACGCGCTAGGTTACCCAACTCAGCCAATGGAATTTGAGAAGTGGACCAGTCTTTGGGATGACAAGCGTGGTTCTGCCAAGGGTGGTGATGGTGCCTTCACGGTCGATATCCTGCGAAGCGGTATGCCTAGCATCGAGTTTCTCAGGGATGTCGTCGTACTCGATAATGCGAAGACCAGGCCGCTACGACTTGCAGTAGAGCGCCCGAAGGTGGACCAAGTACTTCTTGAGACTTACACACGGCACTGGTATGCACGAGGATGGCTACCAAAGCCTCCTACGCAGCAGGACGCAGCAGGAGGCTCTGCTAAGCTTCCCCGAAGAGGTCCTCTCTTCGGTAAGGTTGCCGTAGTCATGGGTGCATCGTCTGGTATTGGCGCTGCCACCGCCACCGCTCTTGCCCGAGAGGGCTGCCATGTCGCCCTTGCAGCTCGTCGCATCGACGCCCTAGAAGATCTAAAGAAGCGACTCGTCATCCGCGAAGGCAAGGTCATTACACAGAAGACCGATGTTACCGACAAATCTCAGGTTGAAGCCCTCGTTGCTGCAGCAGAGAGCCAACTTGGACCTGTCGATATCTTCGTGAATGTTTCAGGAGTGATGTACTTCACCATGATGGCCAACACATACACAGACCAGTGGAACCAAACCGTCGACGTCAACTGCAAAGGTCTCCTCAACGTCATCTCGTCCATCGTGCCTTCGATGCTCAAACGTGGAAAGGGCCACCTCCTTGCCATCTCCTCGGATGCTGGACGGAAGGTCTTCCCTGGCCTAGGCGTCTACTCCGCATCTAAGTTCTTTGTCGAAGCTACACTACAAAGCTTAAGGCTCGAGACTGCTGGTACTGGACTGAGAGTCACTGCCGTGCAGCCAGGAAATGTGGCAACTGATCTCTTGGGTATGAGCACAGACCAAGAGGCGTTGAAGAAGTTTGGAGAGCCAAGCGGAGCAAAGGTTCTGGACCCAGAGAATGTTGCGGAATGCATTGTGTAG
Protein sequence:
MSVIDTTKDLSALFTKQVHATPDLIALEDDNHTYTYQELHDKVAALAERLRGHGVGRDSLVGVLLPRSADYVIACLAALRAGGAFLVLELAYPPDLLADVLEDAQPTLVVTISAEVGKIKGSTPLVVLDETSSTTNGLLDESELKPLPEDTDLDRLAFVAYSSGTTGKPKGIANPHRAAVLSYNLRFGLSDVQPGDRVACNVFFVWEILRPLLRGATVVAVPDEASYDPRMLVDLLASKKITETLFTPTLFSAVLARHQALETRLPNLKTVWLNGEVVTTDLARRGIKALPNTRLLNVYSACETHEIASGDIKDMLEKLDKDAAYCPVGPPLIDRKYIYIVDESGQKVDEGENGELCVGGHLLARGYLNRPETTAKAFIRNQYSSKIGARMYRTGDKARLLSNGLLEITGRVGAMIKIRGYSVVPGKVESAILNHLAVSHCAVVPFGEGIDRQLVAYIVRDKDTSTERPEVEIDRTGRSSTARRMLMAYLAHYMIPALWVEMDSLPTSDVSGKVNLKALPPPRPASPTGSARKFEQSPISIEQITEIWASILSISPSSITPEYNFFDLGGHSLLLADLAARLSNTFGFRVPVARLATPATLNGHLDTVRAIRDGHTAEVQENLPAVLRADSVLDKEIQPKDAKMCALKDAKTVLLTGVTGFLGAFLLRDLLESTSAQIVCMVRFADSSQDDIPAGIARIRRNLLDFGLWSDSIMERVEILPGNLSRKRFGLAPDTFKTLAERIDVIVHAAATVNLVYPYAALQKPNVGGTREVLRLAAQGGATVQYISTNGVLLPAKGREGWSEDAMLDVDEVTKLADGYGQTKWVAEQLALEAGRRGLPIKIHRLGTISGHSETGAANAWDLLTAMIVESVRIGHYPDVKGWRAEMTPVDFVSKAIMHLSNQTETDQTIFHIGDPDPVDVSKVFQDLNALGYPTQPMEFEKWTSLWDDKRGSAKGGDGAFTVDILRSGMPSIEFLRDVVVLDNAKTRPLRLAVERPKVDQVLLETYTRHWYARGWLPKPPTQQDAAGGSAKLPRRGPLFGKVAVVMGASSGIGAATATALAREGCHVALAARRIDALEDLKKRLVIREGKVITQKTDVTDKSQVEALVAAAESQLGPVDIFVNVSGVMYFTMMANTYTDQWNQTVDVNCKGLLNVISSIVPSMLKRGKGHLLAISSDAGRKVFPGLGVYSASKFFVEATLQSLRLETAGTGLRVTAVQPGNVATDLLGMSTDQEALKKFGEPSGAKVLDPENVAECIV
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 136664 | 1259 | 6.16 | -0.052 | 32.09 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR036736,IPR045851,IPR020845,IPR000873,IPR042099,IPR013120,IPR036291,IPR020806,IPR009081,IPR006162,IPR002347,IPR010080
Pfam: PF00106,PF00501,PF07993,PF00550
SMART: SM00823
KEGG:
PRINTS: PR00081