Effector profile
PlantPEAD ID: PlantPEAD03083 | Uniprot ID: R1EWJ0 | Source: Orthologous |
Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 310453 | Pathogen type: Fungi |
Species: Botryosphaeria parva | Strain: strain UCR-NP2 | Other name: Grapevine canker fungus,Neofusicoccum parvum |
Gene name: | NCBI Gene ID: KB915792 | |
Entry name: R1EWJ0_BOTPV | Protein name: Putative polyketide synthase protein | |
DOI: |
Gene/Protein information
Gene sequence:
ATGCTCTCCAACCGCATCAGCCACTTCTATGATCTCCGTGGTCCTTCTCTCACTGTCGACACTGCTTGCTCGAGTGGACTCTATGCCTTCCATCTCGCATGTCAGAGCCTCAGGCTCGGCGAGTCAGAAATCGGCATCGTCTCTGGCTCCAACACCTACCTCTCTCCGCACGCCATGAGCGTCCCCCTTTCCAACGCCGGATTCCTATCCCCGGACGGACGCTGCTACAGCTTCGACCACAAAGCCAACGGATACGCCCGTGGAGAAGGCTTCGGTACCGTCATCATCAAGCCCCTGCGCAACGCCATTCGTGACGGCGACACCATTCGCGCTGTCGTGCGGGCCTCTGGCGTCAACCAGGATGGCCGGACGCCCAGCATCACACAGCCCAGTGCGGTAGCCCAAGCGGCAATGATCCGCACTACTTATGCCGCTGGAGGTCTGGACTTCGGCACCACGCAGTACATCGAGGCCCACGGCACGGGTACAAGCGTCGGAGATCCCCTGGAGGCCCAAGCAATCGGCGAAGTGTTCCGTGACTCTCGCGACGCCGTTCCGCTGCATGTTGGGTCTGTAAAGACCAACATCGGACATCTGGAAGGTGCCAGCGGCCTTGCAGGCCTACTGAAGACCGTGCTCGTCTTGGAGAAAGGACTCATCCCGCCCAATGTCGGGTTTGAGAAACCGAACCCGTCCATTGACACTGAAGGACTCGGCATACAGGTGCTTTGCTGTCCATGCTATTATGAGTCCATGTCTGATTATGTATAG
Protein sequence:
MLSNRISHFYDLRGPSLTVDTACSSGLYAFHLACQSLRLGESEIGIVSGSNTYLSPHAMSVPLSNAGFLSPDGRCYSFDHKANGYARGEGFGTVIIKPLRNAIRDGDTIRAVVRASGVNQDGRTPSITQPSAVAQAAMIRTTYAAGGLDFGTTQYIEAHGTGTSVGDPLEAQAIGEVFRDSRDAVPLHVGSVKTNIGHLEGASGLAGLLKTVLVLEKGLIPPNVGFEKPNPSIDTEGLGIQVLCCPCYYESMSDYV
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
26997.5 | 256 | 5.77 | -0.027 | 33.31 |
Plant infestation information
Experimental plant: | |
Susceptible plant: | Disease name: |
Host classification: | NCBI Species: |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|
No Record found.
External Links
Interpro: IPR018201,IPR014031,IPR014030,IPR020841,IPR016039
Pfam: PF00109,PF02801
SMART: SM00825
KEGG: npa:UCRNP2_1249
PRINTS: