Effector profile
| PlantPEAD ID: PlantPEAD03650 | Uniprot ID: W6XJ34 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 5017 | Pathogen type: Fungi |
| Species: Cochliobolus carbonum | Strain: strain 26-R-13 | Other name: Maize leaf spot fungus,Bipolaris zeicola |
| Gene name: | NCBI Gene ID: KI965003 | |
| Entry name: W6XJ34_COCC2 | Protein name: Apple domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGTCTTCTACTCTTTTCTCAGCCTCGGTACTGGCCTTGCGTGCATCATCACTCATCTGCCCATCGTTACCGACCTGCCCAGACGATAACGAATGTACATTCAGTTCCAATGGAGCCGATTTCAAAGTCAGTTGTGCAACGGACTTCTACGGAGGCGACATGGGACGAGCATACGCCGCGACGGTTGCCGAATGCATGAAGATCTGTGCGTCTACAGATGAATGCGTTGCTCTGAGTTATGTGGGCACGGACTGCTACCTGAAAAACACACTCAACGCTGGCTCAGCCAATACGGGAGTGATGGGCGCGAATATCATCTCTCGTGTCACTCCAACTGCTCCCTCGAGCTCATCAGCGGGGCCGCAACAGCCCTGTCCAGCTTCCATTAACTGCCCTGACAACAATGGCTGTCTCAATTCTGATAGCACCAGCGGCCGTTCTTTTACCTTGAGTTGCGGTGTCGATTTCTTTGGTGGCGATCTCGAGATGCAGTGGGCTGATGGACTAGAAGCCTGCTCAGCCGCATGCGCGGTTAATCCTGAATGTGTTGCAGCATCATTCGTCGGTAATAGTGGCAGCAGCGGACCATGCTATCTCAAGAGCAAAAACCTAGGACAGATCCTAGATTCTCGCGTGAACGGGTTTTCAGCCAATCCGCCATCCGCATCTGTACCTGCAACACCATCTCCTACTCCGGCCAGTCCCGTTGCGGGGGGTATCTCTAAATCGCTCAATACACTTGAAGGGGTTCAATTCTGTGCCTCATATATCAGTTATAGTCCACCAGTAGAAACATTGCGCACAGCCGTTACCATCTCGACTGTCACGGGCACTACAACCACCGACCAAGTCACATCTACACCTCCTGCCGTCAAATTAGTTGAGACCGTAGTAGTTTCTAAAGAAACAACTGTTGTGGCAAGTACAGAAACTGCATTTACAACCACAACGGTGCAGGGTAACCTAGAGAAGAGGTTGCAAGCAACGCCAGCAGCAGCACTCGAAACACCCCACCGAGACCGTGTACACAGCAACGGAAACGAGCTCTACAAAGACAACTATTGTTGTTCTGGCCCCTACGATCACTACGGCCACAACCTCGCCACTCATACGCACAATCAGCGTGACCTCTCGGATCCCGATTGTTGA
Protein sequence:
MSSTLFSASVLALRASSLICPSLPTCPDDNECTFSSNGADFKVSCATDFYGGDMGRAYAATVAECMKICASTDECVALSYVGTDCYLKNTLNAGSANTGVMGANIISRVTPTAPSSSSAGPQQPCPASINCPDNNGCLNSDSTSGRSFTLSCGVDFFGGDLEMQWADGLEACSAACAVNPECVAASFVGNSGSSGPCYLKSKNLGQILDSRVNGFSANPPSASVPATPSPTPASPVAGGISKSLNTLEGVQFCASYISYSPPVETLRTAVTISTVTGTTTTDQVTSTPPAVKLVETVVVSKETTVVASTETAFTTTTVQGNLEKRLQATPAAALETPHRDRVHSNGNELYKDNYCCSGPYDHYGHNLATHTHNQRDLSDPDC
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 39517.8 | 382 | 4.73 | -0.135 | 42.86 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR003609
Pfam: PF14295
SMART:
KEGG: bze:COCCADRAFT_10205
PRINTS: