Effector profile
| PlantPEAD ID: PlantPEAD03905 | Uniprot ID: A0A1B9V5V6 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 362 | Pathogen type: Bacteria |
| Species: Rhizobium radiobacter | Strain: 17-1853-1a | Other name: Agrobacterium tumefaciens,Agrobacterium radiobacter |
| Gene name: DnaJ | NCBI Gene ID: CP011246 | |
| Entry name: A0A1B9V5V6_RHIRD | Protein name: Chaperone protein DnaJ | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCAGCCGTCGAAGAATTCCTTCATCCGGGCAAAGAAGCCGGTCGATTCCGGATTATTCTCCTGGGACGAGAGTTGCTCGAACTCCTGCAACAGCTCGCGCTGGCGCTTGCTGAGCTTCTGCGGTGTCTCGATCTGGATCTGGATGTAGAGATCGCCAGTCTGCGCCGAACGCAGCACCGGCATGCCCTTACCCTTCAGGCGGAACTGCTTGCCTGGCTGGGTGCCTTCCGGAACCGTGACGCGAGACTTCGTGCCGTCGAGCGTCGTCACATCGAAGGTGCCGCCAAGAGCGGCCGTCGTCATGGAGATCGGCACGGTGCAATAGAGATCGGCACCGTCGCGCTGGAAGAACTCATGGGGACGCACGGACAGGAAGATGTAGAGATCGCCCGCCGGGCCGCCACGCATGCCGGCTTCGCCTTCGCCCTGCAGGCGAATGCGGGTGCCATCCTCGATACCCGAGGGAATGTTGACCGAAAGCGAACGCTCTTCCGTCACGCGGCCCTGGCCGTGACACTTGCTGCACGGATCGGAAATCGTCTGTCCACGCCCGTGGCAGGTGGGGCAGGTGCGTTCTACCGAGAAGAAGCCCTGGGCTGCGCGCACGCGGCCGGAACCCTGACAGGTGCCGCAGGTTTTGGGTTGCGTGCCGGGTTTTGCGCCGGAACCGGAACAGACATCGCAGGTTATCGAGGTTGGAACCCTGATCTGCGCCGTCTTGCCGGCAAAGGCTTCTTCCAGCGTGATTTCCATGTTGTAGCGAAGGTCGGCGCCGCGCTCGCGACCGCCGGAAGAGCGGCGTGCGCGTCCGCCGCCCATCATCTCGCCGAAGATGTCTTCGAAGATATCCGAGAAGCCGCCATTGGCGAAACCGCCGCCGCCCATACCACCGCCGCCCATGCCGCCATTTTCAAAGGCGGCGTGGCCAAAACGGTCATAGGCCGCGCGTTTTTGCGGGTCCTTCAGCGTTTCATAGGCTTCGTTGATTTCCTTGAACTTCCGTTCGGAATCAGCATCATCCGGATTCTTGTCCGGATGGTATTTCATCGCGAGTTTGCGGAAGGCGCTTTTCAGCTCTTTTTCGTCCGCGGTCTTGCTGACGCCGAGTGTTTCGTAAAAGTCTGCTTTCGCCAT
Protein sequence:
MAKADFYETLGVSKTADEKELKSAFRKLAMKYHPDKNPDDADSERKFKEINEAYETLKDPQKRAAYDRFGHAAFENGGMGGGGMGGGGFANGGFSDIFEDIFGEMMGGGRARRSSGGRERGADLRYNMEITLEEAFAGKTAQIRVPTSITCDVCSGSGAKPGTQPKTCGTCQGSGRVRAAQGFFSVERTCPTCHGRGQTISDPCSKCHGQGRVTEERSLSVNIPSGIEDGTRIRLQGEGEAGMRGGPAGDLYIFLSVRPHEFFQRDGADLYCTVPISMTTAALGGTFDVTTLDGTKSRVTVPEGTQPGKQFRLKGKGMPVLRSAQTGDLYIQIQIETPQKLSKRQRELLQEFEQLSSQENNPESTGFFARMKEFFDG
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 40925.8 | 377 | 6.96 | -0.642 | 38.94 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR012724,IPR002939,IPR001623,IPR018253,IPR008971,IPR001305,IPR036410,IPR036869
Pfam: PF00226,PF01556,PF00684
SMART: SM00271
KEGG:
PRINTS: PR00625