Effector profile
| PlantPEAD ID: PlantPEAD04193 | Uniprot ID: A0A4Q4RE35 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 119927 | Pathogen type: Fungi |
| Species: Alternaria tenuissima | Strain: FERA 1166 | Other name: |
| Gene name: | NCBI Gene ID: PDXC01000009 | |
| Entry name: A0A4Q4RE35_9PLEO | Protein name: LysM domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
CTACGATATCACAGTGATATTCCCAGTCGAATTCCTGCAGTTCATGGGCAGAGAGATGATTGGTGAATCATCTACATCCGTCTTGGAACTGTAGTTATATGTCGGATTAAACGCCATGATCTGCCCCACGGTTGTGTTAAGCTCGTTGGCTAAATCGACATATGTTCCAAACGTAAACTTGTACGGTTGGACGGTACACTGGCTGGGACTGCACTGTGGAATCTTGATCTGCGTATCGGCCGCAATGACTGCGTCTGCCGATTGCGCAGACACGTTAACACCCATCGTCGTGATGGTGTCAAGGCTGACTTGAAACTTGAGCGCAATGCTCGCGCGAGTGTCGTTGTAGCGCGCGTTATATGTGTGCAGACCACCGGGGACGCAGCTTGCGCAGTAGGTCATGTTGGGGACAAGGCAGGTTGTGTTGTCAATGTCTTGGGCGCAGGACTCTCCAGGTATGAGAAGCGTTTCGCCGGCTACCATGAGGTTTGCGTCGGCCATGCGGTTTGCGCGGGCAATGTTGCAGACACCACGCGAGGTTGAGGCAGCAATGCTGAAAATGGTGTCTATAGAGGTAACAGGCCACGTTCTGACGGTCGTGTTGAGCAT
Protein sequence:
MLNTTVRTWPVTSIDTIFSIAASTSRGVCNIARANRMADANLMVAGETLLIPGESCAQDIDNTTCLVPNMTYCASCVPGGLHTYNARYNDTRASIALKFQVSLDTITTMGVNVSAQSADAVIAADTQIKIPQCSPSQCTVQPYKFTFGTYVDLANELNTTVGQIMAFNPTYNYSSKTDVDDSPIISLPMNCRNSTGNITVIS
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 21660.5 | 202 | 4.75 | 0.05 | 26.11 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR018392,IPR036779
Pfam: PF01476
SMART:
KEGG:
PRINTS: