Effector profile
| PlantPEAD ID: PlantPEAD04220 | Uniprot ID: A0A1X1BYD3 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 472705 | Pathogen type: Bacteria |
| Species: Pantoea conspicua | Strain: LMG 24534 | Other name: |
| Gene name: HofQ | NCBI Gene ID: MLFN01000014 | |
| Entry name: A0A1X1BYD3_9GAMM | Protein name: DNA transporter HofQ | |
| DOI: | ||
Gene/Protein information
Gene sequence:
CTGGCATTTGATAACGCGCCGGTTGAGCGCATTTTACAGGCCCTGGCCGACTACCAGCAGATCAACCTGATTATCGCGCCGGAAGTCGCGGGATCATTGTCGCTGCGGCTGGATGATCTGCCGTGGCATCAGGCACTGGAGCTGGTCGCACGTATGGCAAAGCTGACGCTGATCGAGCACGAGAACGTGTTATTGGTCTATCCGGAAAGCTGGCAGCAGGCGCAGCGGCTGACCCGCGATGAAGAGCAGAAAGATCGGTTGCAACAGGCGCCGCTGCAACAGCGTGCAGTGCTGCTGCATTATGCCAGCGCCAGCGAGATACACCGTAGCCTGCTGGGTGAGCGTCAGTCATTGATGACGCCACGCGGTAGCGTCACGGTGGATAAACGCACCAACACACTGTTAATACGTGATACGGCTGCGGCGTTACAGGAGACGGAGCGCTGGCTAAAGGCGCTCGATCTGCCGCTGGAGCAAATTGAGCTGGCGGCACACATCGTTACCATCAGTGAAGAGCATTTACATGAACTCGGCGTCAACTGGGGACTACAGGCCGGTGACGCGGCAGTCACCCAGGCGCTTCATCATCCGCGGCTGGCGATTCCGCTGGCAGTGAGGTCGCCAGGCGCGAGCGTTGGCATGACGCTCGCGCGCATTGGCGGCCAGCTGCTGGATCTGGAGCTAAGCGCGCTGGAACAGGAAAATCAGATCGAAATTATTGCCAGTCCGCGTCTGTTTACCTCTCATCAGCAAACGGCCTCGATCAAACAGGGTACTGAGATTCCTTATCAGGTCTCGGCCGGTAACAGCGGCGCAACCAGTGTTGAATTTAAAGAAGCGGTGCTGGGGATGGAGGTCACGCCCAGCGTTTCCGGCCAGGGGCGTATCCAGCTTAAAATTCATATCAGTCAGAATATGCCGGGCCGCAATATTAAAACCGGTGACAATGAGGTGCTGTCGATTGATAAACAGGAGATTGAAACCCAGGTAACGGTCAGGGACGGGGAGACACTGGCGCTGGGCGGCATCTTTCAGCAGCAGCGAACCCGGGGAGAAAATCGGGTGCCGATACTGGGAAAGGTGCCGCTGATCGGCGGGCTGTTTCGTCAGCAGTCTGAGCAGCGCAAAAAAAGAGAGCTGGTGATCTTCATTACGCCGCGATTGGTCAGGGAAGCAGCGCTTACGGCTGGATAA
Protein sequence:
MAFDNAPVERILQALADYQQINLIIAPEVAGSLSLRLDDLPWHQALELVARMAKLTLIEHENVLLVYPESWQQAQRLTRDEEQKDRLQQAPLQQRAVLLHYASASEIHRSLLGERQSLMTPRGSVTVDKRTNTLLIRDTAAALQETERWLKALDLPLEQIELAAHIVTISEEHLHELGVNWGLQAGDAAVTQALHHPRLAIPLAVRSPGASVGMTLARIGGQLLDLELSALEQENQIEIIASPRLFTSHQQTASIKQGTEIPYQVSAGNSGATSVEFKEAVLGMEVTPSVSGQGRIQLKIHISQNMPGRNIKTGDNEVLSIDKQEIETQVTVRDGETLALGGIFQQQRTRGENRVPILGKVPLIGGLFRQQSEQRKKRELVIFITPRLVREAALTAG
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 43925.2 | 397 | 5.93 | -0.215 | 50 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR001775,IPR005644,IPR038591,IPR013355,IPR011662,IPR004846,IPR004845
Pfam: PF00263,PF03958
SMART: SM00965
KEGG:
PRINTS: PR00811,PR01032